DPL0322, DPL0322 (genetic_marker) Gossypium hirsutum

Marker Overview
NameDPL0322
AliasDPL322
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDelta Opal
Delta Opal
Source SequenceDPL0322_orig
Source Typegenomic
Repeat Motif(TCA)11
PCR ConditionAnnealing temperature: 55
Primer 1DPL0322_F: AAACCTCGTAGTCATAGGCTCAAA
Primer 2DPL0322_R: AACTATGCACACAGATTTGGTACG
PolymorphismP_ DPL0322
ContactFang, David D.
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Fang, David D.
Description:Molecular markers, fiber development
First name:David
Last name:Fang
Title:Supervisory Research Geneticist
Institution:USDA-ARS-SRRC-CFBRU
Address:1100 Robert E. Lee Blvd, New Orleans, LA 70124
Country:United States
Email:david.fang@usda.gov
Phone:504 286 4527
Fax:001662686-5218
Keywords:Structural Genomics
Last update:2-Jul-2009
Germplasm
Stock NameType
Delta Opalaccession
Delta Opalaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DPL0322_origDPL0322_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch15_Dt.01N/A68.51DPL0322View
2Emian-22 x 3-79, BC1 (2011)AD_ch15_Dt.01N/A116.82DPL0322View
3AD-genome wide Reference Map (2009)AD_ch15_Dt.01N/A119DPL0322View
4Yumian-1 x T586, RIL (2006)AD_ch15_Dt.01N/A48.4DPL0322View
5Yumian-1 x T586, RIL (2015)AD_ch15_Dt.01N/A74DPL0322View
6TM-1 x 3-79, RIL (2014)AD_ch15_Dt.01N/A51.4DPL0322View
70-153 x sGK9708, RIL (2016)AD_ch15_Dt.01N/A28DPL0322View
8CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch15_Dt.01N/A72.7DPL0322View
90-153 x sGK9708, RIL (2017)AD_ch15_Dt.01N/A37.91DPL0322View
10Yumian-1 x T586, RIL (2009)AD_ch15_Dt.01N/A48.4DPL0322/190yView
11TM-1 x 3-79, RIL (2012.v3)AD_ch15_Dt.01N/A51.39DPL0322View
Sequence
>DPL0322 ID=DPL0322; Name=DPL0322; organism=Gossypium hirsutum; type=genetic_marker; length=201bp
AAACCTCGTAGTCATAGGCTCAAAAAGGCTCATCATCATCATCATCATCA
TCATCATCATCATCTCCCTCGTTATTTTCATCGTCATTGTCGTTATCGTC
ATCATCCTCTTCTTCCCCTCGGTTTCGTCGGATGGTGGGACTGGCACATA
TTTGTTGGGCAGTGGATTTGTCACTTCCGTACCAAATCTGTGTGCATAGT
T