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Marker Overview
Name | DPL0176 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Delta Opal |
Source Sequence | DPL0176_orig
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Source Type | genomic |
Repeat Motif | (CT)16+(CAAAA)2+(TTTC)2 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | DPL0176_F: GAAACTGGGAGTGAAAGAACAAGT |
Primer 2 | DPL0176_R: TGGATGTTAGCTTTGGTTTACCC |
Polymorphism | P_ DPL0176 |
Contact | Fang, David D.
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Comment | Primer data obtained in 2007-05 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | AD-genome wide Reference Map (2009) | AD_ch08_At.08 | N/A | 77 | DPL0176 | View |
2 | TM-1 x 3-79, RIL (2012) | AD_ch08_At.08 | N/A | 78.72 | DPL0176 | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch08_At.08 | N/A | 73.96 | DPL0176 | View |
4 | DH962 X Ji Mian 5, F2 (2015) | AD_ch08_At.08 | N/A | 27.62 | DPL0176 | View |
5 | TM-1 x 3-79, RIL (2014) | AD_ch08_At.08 | N/A | 88.5 | DPL0176 | View |
6 | DH962 x Ji Mian 5, RIL (2015) | AD_ch08_At.08 | N/A | 52.4 | DPL0176 | View |
7 | Yumian-1 x T586, RIL (2006) | AD_ch08_At.08 | N/A | 10.2 | DPL0176a | View |
8 | Yumian-1 x T586, RIL (2015) | AD_ch08_At.08 | N/A | 83.3 | DPL0176a | View |
9 | Yumian-1 x T586, RIL (2006) | AD_ch11_At.11 | N/A | 24.8 | DPL0176b | View |
10 | Yumian-1 x T586, RIL (2015) | AD_ch11_At.11 | N/A | 68.6 | DPL0176b | View |
11 | Yumian-1 x T586, RIL (2009) | AD_ch08_At.08 | N/A | 51.6 | DPL0176/210t | View |
12 | Yumian-1 x T586, RIL (2009) | AD_ch11_At.11 | N/A | 24.5 | DPL0176/330t | View |
13 | DH962 x Jinmian-6, F2 (2009) | AD_ch08_At.08 | N/A | 0 | DPL176 | View |
14 | DH962 x Jinmian-6, F2 (2009) | AD_ch08_At.08 | N/A | 0 | DPL176 | View |
15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch08_At.08 | N/A | 88.5 | DPL0176 | View |
Sequence
>DPL0176 ID=DPL0176; Name=DPL0176; organism=Gossypium hirsutum; type=genetic_marker; length=235bp GAAACTGGGAGTGAAAGAACAAGTTGCAAAGTGTAAGACAAGGAAGGGAT ATCACGTGCGGTGTCTCAAGTCAAAACGTAAGGGAAGGCCACCGTATAGC TGTCGGCCACGAGGCAACTGTCATTTTCATCGGGAATTGCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTGCCAAAACAAAATTTCTTTCATTCACCCC CTTGGATTCCGGGGGTAAACCAAAGCTAACATCCA
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