DPL0009, DPL0009 (genetic_marker) Gossypium hirsutum

Marker Overview
NameDPL0009
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDelta Opal
Source SequenceDPL0009_orig
Source Typegenomic
Repeat Motif(GA)13+(AAGAGA)2+(GA)10
PCR ConditionAnnealing temperature: 55
Primer 1DPL0009_F: CACTGATAAAGCTCAGGATTTCTACTC
Primer 2DPL0009_R: GTGACCAAGATTGGAAGAAGAGTT
PolymorphismP_ DPL0009
ContactFang, David D.
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Fang, David D.
Description:Molecular markers, fiber development
First name:David
Last name:Fang
Title:Supervisory Research Geneticist
Institution:USDA-ARS-SRRC-CFBRU
Address:1100 Robert E. Lee Blvd, New Orleans, LA 70124
Country:United States
Email:david.fang@usda.gov
Phone:504 286 4527
Fax:001662686-5218
Keywords:Structural Genomics
Last update:2-Jul-2009
Germplasm
Stock NameType
Delta Opalaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DPL0009_origDPL0009_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch07_At.07N/A87.22DPL0009View
2TM-1 x 3-79, RIL (2014)AD_ch07_At.07N/A49.5DPL0009View
3TM-1 x 3-79, RIL (2012.v3)AD_ch07_At.07N/A49.52DPL0009View
Sequence
>DPL0009 ID=DPL0009; Name=DPL0009; organism=Gossypium hirsutum; type=genetic_marker; length=233bp
CACTGATAAAGCTCAGGATTTCTACTCTAGTATACGAAATACTTTCTCTT
CATTCTTCTAATTTGAAGATAGTAAGATTTTTGAAAAGAGAGAGGGAGAG
AGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAG
AGAGTTGTTCTGGTTCTCCTTAGTCTTAAGTTGAAAATACTTATTGGAGA
AGGAAGAAAAACTCTTCTTCCAATCTTGGTCAC