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Marker Overview
Name | CIR0364 |
Alias | CIR364
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Genbank ID | AJ567297 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567297
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Source Type | genomic |
Repeat Motif | (AC)10 |
PCR Condition | Annealing temperature: 51 |
Primer 1 | CIR364_F: ACTTTCATTTCGTGTGGT |
Primer 2 | CIR364_R: TGTTCATGCTTGTATCGT |
Product Length | 153 |
Polymorphism | P_ CIR0364 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch19_Dt.05 | N/A | 134.2 | CIR364 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch05_At.05 | N/A | 97.3 | CIR364 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch05_At.05 | N/A | 77.2 | CIR364 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 66.66 | CIR364 | View |
5 | Yumian-1 x T586, F2:7 (2008) | AD_ch05_At.05 | N/A | 0 | CIR364 | View |
6 | Yumian-1 x T586, RIL (2006) | AD_ch05_At.05 | N/A | 21.1 | CIR364 | View |
7 | Yumian-1 x T586, RIL (2015) | AD_ch05_At.05 | N/A | 58.5 | CIR364 | View |
8 | TM-1 x 3-79, RIL (2014) | AD_ch19_Dt.05 | N/A | 118.5 | CIR364 | View |
9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch19_Dt.05 | N/A | 142.5 | CIR364 | View |
10 | Deltapine-61 x Texas-701, F2 (2007) | AD_ch19_Dt.05 | N/A | 64.3 | C1R364-158 | View |
11 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch05_At.05 | N/A | 63 | CIR364-139 | View |
12 | AD-genome wide Reference Map (2009) | AD_ch05_At.05 | N/A | 76 | cir0364 | View |
13 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 134 | cir0364 | View |
14 | Yumian-1 x T586, RIL (2009) | AD_ch05_At.05 | N/A | 21.1 | CIR364/150y(C5) | View |
15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch19_Dt.05 | N/A | 118.52 | CIR364 | View |
Sequence
>CIR0364 ID=CIR0364; Name=CIR0364; organism=Gossypium hirsutum; type=genetic_marker; length=153bp ACTTTCATTTCGTGTGGTAAAATCTCGAAGACATTACTCTTTATCATCCT CTCTAGACCTAACATGATGCCTTCATTAATGAAAACACACACACACACAC ACACGCACACACTATACTGATTGCTTCATTGAGAAACGATACAAGCATGA ACA
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