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Marker Overview
| Name | CIR0334 |
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| Alias | CIR334
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| Genbank ID | AJ567271 |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Guazuncho-2 |
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| Source Sequence | AJ567271
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| Source Type | genomic |
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| Repeat Motif | (AC)7 |
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| PCR Condition | Annealing temperature: 51 |
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| Primer 1 | CIR334_F: ACCCTTGACAGTTACCAC |
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| Primer 2 | CIR334_R: TGCCCATTTAGGTATGA |
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| Product Length | 167 |
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| Publication | [view all] |
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| Comment | Primer data obtained in 2005 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 75.17 | CIR334 | View |
| 2 | Yumian-1 x T586, RIL (2006) | AD_ch15_Dt.01 | N/A | 56.8 | CIR334 | View |
| 3 | Yumian-1 x T586, RIL (2015) | AD_ch15_Dt.01 | N/A | 78.6 | CIR334 | View |
| 4 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 44.7 | CIR334 | View |
| 5 | W10 x TM-1, F2:3 (2015) | AD_ch15_Dt.01 | N/A | 54.5 | CIR334 | View |
| 6 | GX1135 x GX100-2, F2 (2013) | AD_ch01_At.01 | N/A | 73.1 | CIR334 | View |
| 7 | GX1135 x GX100-2, RIL (2015) | AD_ch15_Dt.01 | N/A | 4.7 | CIR334 | View |
| 8 | GX1135 x GX100-2, RIL (2016) | AD_ch15_Dt.01 | N/A | 4.7 | CIR334 | View |
| 9 | 0-153 x sGK9708, RIL (2016) | AD_ch15_Dt.01 | N/A | 43.3 | CIR334 | View |
| 10 | Yumian-1 x T586, RIL (2009) | AD_ch15_Dt.01 | N/A | 56.8 | CIR334/180y | View |
| 11 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 44.72 | CIR334 | View |
Sequence
>CIR0334 ID=CIR0334; Name=CIR0334; organism=Gossypium hirsutum; type=genetic_marker; length=167bp
ACCCTTGACAGTTACCACAGCGCCATCTGCTAACATTACCTTTTTCAAGA
CACCAGCATCCACATCATGCTGCATGATTTAACCATCGACAAGATTAATC
AATTGACTTCAAAAGATTACACACACACACACAAAAGACACATCTTATAG
TCATACCTAAATGGGCA
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