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Marker Overview
Name | CIR0332 |
Alias | CIR332
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Genbank ID | AJ567269 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567269
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Source Type | genomic |
Repeat Motif | (TG)8 |
PCR Condition | Annealing temperature: 51 |
Primer 1 | CIR332_F: CTACGCATGAGACGATAC |
Primer 2 | CIR332_R: CAACGCCAATAACAATAC |
Product Length | 167 |
Polymorphism | P_ CIR0332 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch03_At.03 | N/A | 37.4 | CIR332 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch03_At.03 | N/A | 95.8 | CIR332 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch03_At.03 | N/A | 74 | CIR332 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 36.86 | CIR332 | View |
5 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch03_At.03 | N/A | 1.6 | CIR332 | View |
6 | T582 x Hai-7124, F2 (2010) | AD_ch03_At.03 | N/A | 53.3 | CIR332 | View |
7 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 79.5 | CIR332 | View |
8 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 169 | cir0332 | View |
9 | TM-1 x Hai-7124, BC1 (2007) | AD_ch03_At.03 | N/A | 53.3 | CIR332-330 | View |
10 | TM-1 x Hai-7124, BC1 (2008) | AD_ch03_At.03 | N/A | 52.87 | CIR332-330 | View |
11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch03_At.03 | N/A | 49.8 | CIR332-330 | View |
12 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 79.51 | CIR332 | View |
13 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch03_At.03 | N/A | 88.7 | CIR332 | View |
Sequence
>CIR0332 ID=CIR0332; Name=CIR0332; organism=Gossypium hirsutum; type=genetic_marker; length=167bp CTACGCATGAGACGATACTTGGAGTTTCTTAGTGTCTGCTATATTATTTT GGTGCCAATATTATACAATTATAAGGTGTTTTGTGCTTATGTGTGTGTGT GTGTGCGGGCGCGCGCTTAATTTCATCCGAGTTTGTGTATTATGTATCTG TATTGTTATTGGCGTTG
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