|
|
Marker Overview
| Name | CIR0328 |
|---|
| Alias | CIR328
|
|---|
| Genbank ID | AJ567265 |
|---|
| Type | SSR |
|---|
| Species | Gossypium hirsutum |
|---|
| Germplasm | Guazuncho-2 |
|---|
| Source Sequence | AJ567265
|
|---|
| Source Type | genomic |
|---|
| Repeat Motif | (CA)5 |
|---|
| PCR Condition | Annealing temperature: 51 |
|---|
| Primer 1 | CIR328_F: ATCCCTATGCTTGTCATC |
|---|
| Primer 2 | CIR328_R: ATTACCATTCATTCACCAC |
|---|
| Product Length | 210 |
|---|
| Polymorphism | P_ CIR0328 |
|---|
| Publication | [view all] |
|---|
| Comment | Primer data obtained in 2005 |
|---|
Cross References
External references for this genetic_marker
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch05_At.05 | N/A | 0 | CIR328 | View |
| 2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch05_At.05 | N/A | 27.9 | CIR328 | View |
| 3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch05_At.05 | N/A | 337.8 | CIR328 | View |
| 4 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch05_At.05 | N/A | 138.27 | CIR328 | View |
| 5 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch05_At.05 | N/A | 108.93 | CIR328 | View |
| 6 | TM-1 x 3-79, RIL (2012) | AD_ch05_At.05 | N/A | 199.19 | CIR328 | View |
| 7 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch05_At.05 | N/A | 0 | CIR328 | View |
| 8 | Yumian-1 x 7235, RIL (2015) | AD_ch05_At.05 | N/A | 118.9 | CIR328 | View |
| 9 | TM-1 x 3-79, RIL (2014) | AD_ch05_At.05 | N/A | 3.5 | CIR328 | View |
| 10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch22_Dt.04 | N/A | 101.5 | CIR328 | View |
| 11 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch05_At.05 | N/A | 59 | CIR328-215 | View |
| 12 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch05_At.05 | N/A | 59 | CIR328-219 | View |
| 13 | AD-genome wide Reference Map (2009) | AD_ch05_At.05 | N/A | 311 | cir0328 | View |
| 14 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch05_At.05 | N/A | 209.11 | CIR328 | View |
| 15 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch22_Dt.04 | N/A | 3.85 | CIR328b | View |
| 16 | TM-1 x 3-79, RIL (2012.v3) | AD_ch05_At.05 | N/A | 3.54 | CIR328 | View |
Sequence
>CIR0328 ID=CIR0328; Name=CIR0328; organism=Gossypium hirsutum; type=genetic_marker; length=210bp
ATCCCTATGCTTGTCATCCGATTCCGAGGGCTGACAAAAAGAAGACTAAG
TGTGCATTTCTTTCTTCTTTATTTACTTATTGTTTTGTATATGTGGTAAG
TAGGTTATTGGGATGGTTGGATATATATTCTTTTAGTTTAGTTGAACACA
AACACACACACAGAGTTATGTATAATCCAATCATTTCTGAGGTGGTGAAT
GAATGGTAAT
|
