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Marker Overview
Name | CIR0307 |
Alias | CIR307
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Genbank ID | AJ567250 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567250
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Source Type | genomic |
Repeat Motif | (AC)18 |
PCR Condition | Annealing temperature: 46 |
Primer 1 | CIR307_F: GACTTGAAAAGATTACACAC |
Primer 2 | CIR307_R: GAATTTGCTGGCTCT |
Product Length | 182 |
Polymorphism | P_ CIR0307 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch15_Dt.01 | N/A | 0 | CIR307 | View |
2 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 75.21 | CIR307 | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch15_Dt.01 | N/A | 121.11 | CIR307 | View |
4 | DH962 x Jinmian-6, F2 (2009) | AD_ch15_Dt.01 | N/A | 72.4 | CIR307 | View |
5 | DH962 x Jinmian-6, F2 (2009) | AD_ch15_Dt.01 | N/A | 72.4 | CIR307 | View |
6 | Yumian-1 x 7235, RIL (2015) | AD_ch15_Dt.01 | N/A | 88.9 | CIR307 | View |
7 | DH962 X Ji Mian 5, F2 (2015) | AD_ch01_At.01 | N/A | 32.91 | CIR307 | View |
8 | DH962 X Ji Mian 5, F2 (2015) | AD_ch15_Dt.01 | N/A | 32.91 | CIR307 | View |
9 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 44.7 | CIR307 | View |
10 | GX1135 x GX100-2, F2 (2013) | AD_ch01_At.01 | N/A | 92.4 | CIR307 | View |
11 | GX1135 x GX100-2, RIL (2015) | AD_ch15_Dt.01 | N/A | 4.7 | CIR307 | View |
12 | GX1135 x GX100-2, RIL (2016) | AD_ch15_Dt.01 | N/A | 4.7 | CIR307 | View |
13 | 0-153 x sGK9708, RIL (2016) | AD_ch15_Dt.01 | N/A | 40.4 | CIR307 | View |
14 | DH962 x Ji Mian 5, RIL (2015) | AD_ch15_Dt.01 | N/A | 0 | CIR307 | View |
15 | 901-001 x sGK156, F2 (2019) | AD_ch15_Dt.01 | N/A | 158.14 | CIR307 | View |
16 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch15_Dt.01 | N/A | 0 | CIR307-176 | View |
17 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 52 | cir0307 | View |
18 | TM-1 x Hai-7124, BC1 (2007) | AD_ch15_Dt.01 | N/A | 73.4 | CIR307-160 | View |
19 | TM-1 x Hai-7124, BC1 (2008) | AD_ch15_Dt.01 | N/A | 72.07 | CIR307-160 | View |
20 | TM-1 x Hai-7124, BC1 (2012) | AD_ch15_Dt.01 | N/A | 53.5 | CIR307-160 | View |
21 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 44.69 | CIR307 | View |
22 | MGG-293-793, MAGIC (2018) | AD_ch15_Dt.01 | N/A | 134 | CIR307 | View |
Sequence
>CIR0307 ID=CIR0307; Name=CIR0307; organism=Gossypium hirsutum; type=genetic_marker; length=182bp GACTTGAAAAGATTACACACACACACACACACACACACACACACACACAC ATCCTATAGTCATACCTAAATGGGAAACGGTCCCAAAAAGAGAATCTAAA TTCAAAGTGCAAAAGCGAAAAACTACTTCGTTTTTAAAAGAAGTTACTTT AGTACATCTTAAATTGCAGAGCCAGCAAATTC
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