CIR0299, CIR0299 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0299
AliasCIR299
Genbank IDAJ567242
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567242
Source Typegenomic
Repeat Motif(GT)6(N)3(AT)5
PCR ConditionAnnealing temperature: 55
Primer 1CIR299_F: AACAAGCACACATCTCTTAT
Primer 2CIR299_R: GGTAGACCTTGAAATCGT
Product Length134
PolymorphismP_ CIR0299
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567242
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567242AJ567242Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch25_Dt.06N/A111.4CIR299View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch25_Dt.06N/A87.24CIR299View
3AD-genome wide Reference Map (2009)AD_ch25_Dt.06N/A144cir0299View
Sequence
>CIR0299 ID=CIR0299; Name=CIR0299; organism=Gossypium hirsutum; type=genetic_marker; length=134bp
AACAAGCACACATCTCTTATAAAACCACAAAACATACATCTTTTACCAAA
CATACACACACACACGTGTATATATATACAAGTTACTCCTATTACATGCC
ACAAATTTGAAATATAACGATTTCAAGGTCTACC