CIR0298, CIR0298 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0298
AliasCIR298
Genbank IDAJ567241
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567241
Source Typegenomic
Repeat Motif(TG)9
PCR ConditionAnnealing temperature: 55
Primer 1CIR298_F: TCTACAATGAACCCAACA
Primer 2CIR298_R: TCCTTGCTCCCATTC
Product Length202
PolymorphismP_ CIR0298
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567241
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567241AJ567241Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch25_Dt.06N/A9.8CIR298View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch06_At.06N/A0CIR298View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch06_At.06N/A12.59CIR298View
4Emian-22 x 3-79, BC1 (2011)AD_ch25_Dt.06N/A138.18CIR298View
5AD-genome wide Reference Map (2009)AD_ch25_Dt.06N/A20cir0298View
6AD-genome wide Reference Map (2009)AD_ch06_At.06N/A3cir0298View
7PD 94042 x (AD)4-08, F2 (2016)AD_ch06_At.06N/A31.4CIR298View
Sequence
>CIR0298 ID=CIR0298; Name=CIR0298; organism=Gossypium hirsutum; type=genetic_marker; length=202bp
TCTACAATGAACCCAACAACTTCAATCCTTCAAGGTTTGATGTAAGTATC
TTTGCTTATGCTAAAAAAAAACAACCATTTTGATTTATAAAATCGTGGAA
GATGATGAATGTGTGTGTGTGTGTGTGTTTTTTTTTGCACCACATAGGAT
GAACATTTTTGTAAGCCATACAGCTTCTTAGCATTTGGAATGGGAGCAAG
GA