CIR0295, CIR0295 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0295
AliasCIR295
Genbank IDAJ567239
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567239
Source Typegenomic
Repeat Motif(GT)7
PCR ConditionAnnealing temperature: 55
Primer 1CIR295_F: ATCACGCCAAAGAAAC
Primer 2CIR295_R: TGTGGAGGCGTAAACT
Product Length346
PolymorphismP_ CIR0295
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567239
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567239AJ567239Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch14_Dt.02N/A39.48CIR295View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch14_Dt.02N/A180.9CIR295View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch14_Dt.02N/A124.08CIR295View
4Handan-208 x Pima-90, F2:3 (2007)AD_ch14_Dt.02N/A38.9CIR295View
5SG 747 x Giza 75, BIL (2013)AD_ch05_At.05N/A78CIR295View
6AD-genome wide Reference Map (2009)AD_ch14_Dt.02N/A195cir0295View
Sequence
>CIR0295 ID=CIR0295; Name=CIR0295; organism=Gossypium hirsutum; type=genetic_marker; length=346bp
ATCACGCCAAAGAAACCAAAAGGAGTTCATGTTTGGCATTTTCAAAGGCA
AAAACAGTATCATTTGATGCTTAATTTGCAACTTGGTATAAGGTAATTAA
TCAAGATTGGATTTCCTTCCTTTTCTTTAACAACTCAACTATATTTTTAC
GTGTGTGTGTGTGTGCATGTATGTATATTATCTTGGATTTATTACATGTT
ATAACATGATTGATTGAAGTTCACAGGTATACTGTTTGGCAAGATAACAC
GGTCCCTAAGCGTGAGGTTCGAACTGCTGATTTTGGCCATCGAGCCAGAA
TTACTATGTTTTTCCCTAGAAGGGGTTCACAGTTTACGCCTCCACA