CIR0277, CIR0277 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0277
AliasCIR277
Genbank IDAJ567221
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567221
Source Typegenomic
Repeat Motif(AC)9
PCR ConditionAnnealing temperature: 49
Primer 1CIR277_F: TGAGTTGGGAAGTAAATG
Primer 2CIR277_R: CCTGTTGCTTGGATG
Product Length213
PolymorphismP_ CIR0277
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567221
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567221AJ567221Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch18_Dt.13N/A48.8CIR277aView
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch19_Dt.05N/A215CIR277bView
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch18_Dt.13N/A48.18CIR277View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch19_Dt.05N/A166.11CIR277View
5Guazuncho-2 x VH8-4602, RIL (2009)AD_ch18_Dt.13N/A37.38CIR277View
6AD-genome wide Reference Map (2009)AD_ch19_Dt.05N/A302cir0277View
7AD-genome wide Reference Map (2009)AD_ch18_Dt.13N/A118cir0277View
8PD 94042 x (AD)4-08, F2 (2016)AD_ch18_Dt.13N/A150.6CIR277View
Sequence
>CIR0277 ID=CIR0277; Name=CIR0277; organism=Gossypium hirsutum; type=genetic_marker; length=213bp
TGAGTTGGGAAGTAAATGAGTAANATTGCAGGTGAGCCATTGCTTTTTCT
TTTTTTTTTTTCTTCAAGTGACGTCAGATTCAGTTGANAGAAATAAGATT
ACAACATTCAAACACACACACACACACACAGGTGCTTGAAAAACCAGCAA
ATGGTAAAAGTTCCTCAGACAAAATNAACAGCTCGAACAGGCCAGCNTCA
TCCAAGCAACAGG