CIR0152, CIR0152 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0152
AliasCIR152
Genbank IDAJ567100
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567100
Source Typegenomic
Repeat Motif(TG)8
PCR ConditionAnnealing temperature: 55
Primer 1CIR152_F: TCCATAAATCTCAACCCT
Primer 2CIR152_R: CGTTCACTTCCCTTTG
Product Length335
PolymorphismP_ CIR0152
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567100
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567100AJ567100Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch05_At.05N/A75.18CIR152aView
2TM-1 x 3-79, RIL (2014)AD_ch05_At.05N/A123.8CIR152aView
3TM-1 x 3-79, RIL (2012)AD_ch19_Dt.05N/A87.14CIR152cView
4TM-1 x 3-79, RIL (2014)AD_ch19_Dt.05N/A98.6CIR152cView
5TM-1 x 3-79, RIL (2012.v3)AD_ch05_At.05N/A123.78CIR152aView
6TM-1 x 3-79, RIL (2012.v3)AD_ch19_Dt.05N/A98.63CIR152cView
Sequence
>CIR0152 ID=CIR0152; Name=CIR0152; organism=Gossypium hirsutum; type=genetic_marker; length=335bp
TCCATAAATCTCAACCCTTTGACTGTAGTCCTCATTTTTCTCTCTCTGAA
ATTTTATTTTTTCCAGTTTCAGATTGCATAAGTCTCTCTTTCTCTATTTG
TAGCTAAGGATTGGAGCAATCTGGAGTTTTTTCCCCCCCTGTTAATCGTT
AGCTTCCTTGATGCTTTTGGTTTTCACATTTTTCTTTTTTCTTTTGTAAT
CAAGCTTTGATTTTGTTGCTAGGAATTTTAGCTCATTATGTTTAGTGGTA
GTTCCTCTTTGCAGGGTTCTTGAATAGGTTGTGTGTGTGTGTGTGTTTTT
TTCTGGGGGGGAGCGTTAACAAAGGGAAGTGAACG