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Marker Overview
Name | CIR0148 |
Alias | CIR148
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Genbank ID | AJ567096 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ567096
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Source Type | genomic |
Repeat Motif | (TG)8 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | CIR148_F: CTAATCTTTGGATTCTACCC |
Primer 2 | CIR148_R: TCCAAGCCCAGATAAGT |
Product Length | 135 |
Polymorphism | P_ CIR0148 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch12_At.12 | N/A | 88.1 | CIR148 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch12_At.12 | N/A | 55 | CIR148 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch12_At.12 | N/A | 51.88 | CIR148 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch12_At.12 | N/A | 84.47 | CIR148 | View |
5 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch12_At.12 | N/A | 17.7 | CIR148 | View |
6 | Yumian-1 x T586, RIL (2006) | AD_ch12_At.12 | N/A | 19.8 | CIR148 | View |
7 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch12_At.12 | N/A | 47.4 | CIR148 | View |
8 | Yumian-1 x T586, RIL (2015) | AD_ch12_At.12 | N/A | 77.4 | CIR148 | View |
9 | Yumian-1 x 7235, RIL (2015) | AD_ch12_At.12 | N/A | 133.8 | CIR148 | View |
10 | TM-1 x 3-79, RIL (2014) | AD_ch12_At.12 | N/A | 84.5 | CIR148 | View |
11 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch12_At.12 | N/A | 92 | CIR148-145 | View |
12 | AD-genome wide Reference Map (2009) | AD_ch12_At.12 | N/A | 91 | cir0148 | View |
13 | Yumian-1 x T586, RIL (2009) | AD_ch12_At.12 | N/A | 19.8 | CIR148/150t(C12) | View |
14 | TM-1 x 3-79, RIL (2012.v3) | AD_ch12_At.12 | N/A | 84.47 | CIR148 | View |
Sequence
>CIR0148 ID=CIR0148; Name=CIR0148; organism=Gossypium hirsutum; type=genetic_marker; length=135bp CTAATCTTTGGATTCTACCCCCCCCCAAAAAAAAATATTGAATTACCATA CAATTCTTTTAAAATATGAAATTGAAAAATATTTATTTAGCTTCCAGATG TTGTGTGTGTGTGTGTGTACTTATCTGGGCTTGGA
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