CIR0148, CIR0148 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0148
AliasCIR148
Genbank IDAJ567096
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567096
Source Typegenomic
Repeat Motif(TG)8
PCR ConditionAnnealing temperature: 55
Primer 1CIR148_F: CTAATCTTTGGATTCTACCC
Primer 2CIR148_R: TCCAAGCCCAGATAAGT
Product Length135
PolymorphismP_ CIR0148
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567096
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567096AJ567096Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch12_At.12N/A88.1CIR148View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch12_At.12N/A55CIR148View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch12_At.12N/A51.88CIR148View
4TM-1 x 3-79, RIL (2012)AD_ch12_At.12N/A84.47CIR148View
5Zhongmiansuo-12 x 8891, RIL (2007)AD_ch12_At.12N/A17.7CIR148View
6Yumian-1 x T586, RIL (2006)AD_ch12_At.12N/A19.8CIR148View
7(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch12_At.12N/A47.4CIR148View
8Yumian-1 x T586, RIL (2015)AD_ch12_At.12N/A77.4CIR148View
9Yumian-1 x 7235, RIL (2015)AD_ch12_At.12N/A133.8CIR148View
10TM-1 x 3-79, RIL (2014)AD_ch12_At.12N/A84.5CIR148View
11HS-46 x MARCABUCAG8US-1-88, RIL (2009)AD_ch12_At.12N/A92CIR148-145View
12AD-genome wide Reference Map (2009)AD_ch12_At.12N/A91cir0148View
13Yumian-1 x T586, RIL (2009)AD_ch12_At.12N/A19.8CIR148/150t(C12)View
14TM-1 x 3-79, RIL (2012.v3)AD_ch12_At.12N/A84.47CIR148View
Sequence
>CIR0148 ID=CIR0148; Name=CIR0148; organism=Gossypium hirsutum; type=genetic_marker; length=135bp
CTAATCTTTGGATTCTACCCCCCCCCAAAAAAAAATATTGAATTACCATA
CAATTCTTTTAAAATATGAAATTGAAAAATATTTATTTAGCTTCCAGATG
TTGTGTGTGTGTGTGTGTACTTATCTGGGCTTGGA