CIR0063, CIR0063 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0063
AliasCIR63
CIR063
Genbank IDAJ567012
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567012
Source Typegenomic
Repeat Motif(CA)6
PCR ConditionAnnealing temperature: 55
Primer 1CIR063_F: CACTATAAACCCAAGCAGT
Primer 2CIR063_R: GTGTGTTGTTGTTGAGGA
Product Length157
PolymorphismP_ CIR0063
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567012
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567012AJ567012Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch20_Dt.10N/A51.4CIR063View
2Emian-22 x 3-79, BC1 (2011)AD_ch20_Dt.10N/A71.35CIR063View
3Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch20_Dt.10N/A151.3CIR063View
4TM-1 x 3-79, RIL (2012)AD_ch20_Dt.10N/A52.28CIR063View
5Guazuncho-2 x VH8-4602, consensus (2009)AD_ch20_Dt.10N/A80.51CIR063View
6TM-1 x 3-79, RIL (2014)AD_ch20_Dt.10N/A53.4CIR063View
7Handan-208 x Pima-90, F2:3 (2007)AD_ch20_Dt.10N/A172.1CIR063bView
8AD-genome wide Reference Map (2009)AD_ch20_Dt.10N/A103cir0063View
9TM-1 x 3-79, RIL (2012.v3)AD_ch20_Dt.10N/A53.45CIR063View
Sequence
>CIR0063 ID=CIR0063; Name=CIR0063; organism=Gossypium hirsutum; type=genetic_marker; length=157bp
CACTATAAACCCAAGCAGTACCTGTACCAAACTTAAGACTAAAACACACA
TCTAGAGCACTTCACACTGAAGCAGTTACACATATTTCATCACACACACA
CACCAAAACATTAACCAGTGAACATGTCGAACAAATCTGTCCTCAACAAC
AACACAC