CIR0047, CIR0047 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0047
AliasCIR47
CIR047
Genbank IDAJ566996
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ566996
Source Typegenomic
Repeat Motif(CA)7
PCR ConditionAnnealing temperature: 51
Primer 1CIR047_F: ATTCTACCAAACCTCTACC
Primer 2CIR047_R: CCCGTGTGAGTGAAA
Product Length76
PolymorphismP_ CIR0047
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ566996
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ566996AJ566996Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch14_Dt.02N/A66.1CIR047View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch14_Dt.02N/A52.97CIR047View
3Guazuncho-2 x VH8-4602, RIL (2009)AD_ch14_Dt.02N/A49.72CIR047View
4AD-genome wide Reference Map (2009)AD_ch14_Dt.02N/A138cir0047View
Sequence
>CIR0047 ID=CIR0047; Name=CIR0047; organism=Gossypium hirsutum; type=genetic_marker; length=76bp
ATTCTACCAAACCTCTACCACTCAACCGGCACACACACACACAGAAGCAA
AAATTATCACCTTTCACTCACACGGG