CIR0036, CIR0036 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0036
AliasCIR36
CIR036
Genbank IDAJ566985
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ566985
Source Typegenomic
Repeat Motif(CA)7
PCR ConditionAnnealing temperature: 55
Primer 1CIR036_F: GTGAGACTTGAACCCAA
Primer 2CIR036_R: GACTCACAACCTGATTCTAC
Product Length183
PolymorphismP_ CIR0036
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ566985
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ566985AJ566985Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch22_Dt.04N/A72.3CIR036View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch22_Dt.04N/A25.7CIR036View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch22_Dt.04N/A28.53CIR036View
4TM-1 x 3-79, RIL (2012)AD_ch22_Dt.04N/A40.03CIR036View
5TM-1 x 3-79, RIL (2014)AD_ch22_Dt.04N/A73.8CIR036View
6AD-genome wide Reference Map (2009)AD_ch22_Dt.04N/A22cir0036View
7TM-1 x 3-79, RIL (2012.v3)AD_ch22_Dt.04N/A73.77CIR036View
Sequence
>CIR0036 ID=CIR0036; Name=CIR0036; organism=Gossypium hirsutum; type=genetic_marker; length=183bp
GTGAGACTTGAACCCAAGACCTACACACACACACATCAGAGCACTTAACC
ACTGAAGCAGATACTCATTTATATGAGATATTTACGAAAATAGAAATAAA
TAAGTCAGGGCGTTACAACACATAAGCTACTTGTCACTTTATAGCATCCA
AAAATCAGGGGTAGTAGAATCAGGTTGTGAGTC