CGR6378, CGR6378 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCGR6378
Genbank IDGQ394036
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 33 B
Source SequenceMONCS1001
Source Typegenomic
PCR ConditionAnnealing temperature: 55
Primer 1CGR6378_F: CCATGTTGGATATGGCTACG
Primer 2CGR6378_R: AACCCTCAACCAACCTTGAA
Publication[view all]
ContactMonsanto
CommentPrimer data obtained in 2009-05
Contact
NameDetails
Monsanto
Country:United States
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankGQ394036
Germplasm
Stock NameType
Deltapine 33 Baccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
MONCS1001MONCS1001Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch01_At.01N/A67.7MON_CGR6378View
2Yumian-1 x 7235, RIL (2015)AD_ch01_At.01N/A31.6CGR6378View
3CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch01_At.01N/A76.1CGR6378View
4CCRI-35 x Yumian-1, RIL (2015)AD_ch01_At.01N/A109.7CGR6378View
5CCRI-36 x G2005, RIL (2016)AD_ch15_Dt.01N/A2.6CGR6378View
6CCRI-35 x Yumian-1, RIL (2017)AD_ch01_At.01N/A42.74CGR6378View
Sequence
>CGR6378 ID=CGR6378; Name=CGR6378; organism=Gossypium hirsutum; type=genetic_marker; length=292bp
CCATGTTGGATATGGCTACGTGAAAACCCACCTAATTTAAGAAGAAATTG
AAAAAAATAACCCTAACAACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGA
GACTGTAAAATTGTTGAGGTTTTTTTCCCATATTATTTTTCTTCTTCCCT
TAATTGTTGCTATTGTGGATTAGAAACAATAATTAACAAACCAAGGTGTT
GGATTAGAAATCAATTTCAAGGTTCAAGGTTGGTTGAGGGTT