|
|
Marker Overview
| Name | CGR5578 |
|---|
| Genbank ID | GQ393575 |
|---|
| Type | SSR |
|---|
| Species | Gossypium hirsutum |
|---|
| Germplasm | Deltapine 33 B |
|---|
| Source Sequence | MONCS0540
|
|---|
| Source Type | genomic |
|---|
| PCR Condition | Annealing temperature: 55 |
|---|
| Primer 1 | CGR5578_F: ACCACCCGATACCCAAAGAT |
|---|
| Primer 2 | CGR5578_R: GTGCCGCCACTGGTAAACT |
|---|
| Publication | [view all] |
|---|
| Contact | Monsanto
|
|---|
| Comment | Primer data obtained in 2009-05 |
|---|
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch17_Dt.03 | N/A | 79.5 | CGR5578a | View |
| 2 | Monsanto SSR Bin Map, (2009) | AD_ch11_At.11 | N/A | 21 | CGR5578a | View |
| 3 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch21_Dt.11 | N/A | 6.8 | CGR5578b | View |
| 4 | Monsanto SSR Bin Map, (2009) | AD_ch21_Dt.11 | N/A | 21 | CGR5578b | View |
| 5 | Yumian-1 x T586, RIL (2015) | AD_ch21_Dt.11 | N/A | 4.1 | CGR5578 | View |
| 6 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch21_Dt.11 | N/A | 85.7 | CGR5578 | View |
| 7 | LMY22 x LY343, RIL (2016) | chr.21-1 | N/A | 61.8 | CGR5578 | View |
| 8 | LMY22 x LY343, RIL (2020) | D11 | N/A | 27.26 | CGR5578 | View |
| 9 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch11_At.11 | N/A | 48.5 | CGR5578c | View |
| 10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch21_Dt.11 | N/A | 107.8 | CGR5578 | View |
| 11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 33.2 | cgr5578-150 | View |
Sequence
>CGR5578 ID=CGR5578; Name=CGR5578; organism=Gossypium hirsutum; type=genetic_marker; length=163bp
ACCACCCGATACCCAAAGATTTTTCAACTTTTATTTATTTATTGATAAAA
AAGACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAAATTTTAGAAGCAAAGAGTGAAAAAGAAAAAAAGTTTA
CCAGTGGCGGCAC
|
