CGR5534, CGR5534 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCGR5534
Genbank IDGQ393539
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 33 B
Source SequenceMONCS0504
Source Typegenomic
PCR ConditionAnnealing temperature: 55
Primer 1CGR5534_F: TCAAGTGCAGCAAGGATGTC
Primer 2CGR5534_R: TGAACACTGGCGTTCTGAAG
Publication[view all]
ContactMonsanto
CommentPrimer data obtained in 2009-05
Contact
NameDetails
Monsanto
Country:United States
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankGQ393539
Germplasm
Stock NameType
Deltapine 33 Baccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
MONCS0504MONCS0504Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x T586, RIL (2015)AD_ch02_At.02N/A16.8CGR5534View
2GX1135 x GX100-2, F2 (2013)AD_ch11_At.11N/A54.3CGR5534View
3GX1135 x GX100-2, RIL (2015)AD_ch02_At.02N/A7.4CGR5534View
4GX1135 x GX100-2, RIL (2016)AD_ch02_At.02N/A7.4CGR5534View
5CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch02_At.02N/A14.8CGR5534View
6Monsanto SSR Bin Map, (2009)AD_ch02_At.02N/A81CGR5534View
7MGG-293-793, MAGIC (2018)AD_ch02_At.02N/A17.3CGR5534View
Sequence
>CGR5534 ID=CGR5534; Name=CGR5534; organism=Gossypium hirsutum; type=genetic_marker; length=142bp
TCAAGTGCAGCAAGGATGTCCATCTCTCTTTTTGAATCCAACGTTCGGTT
CTCCAACCATCCCTTGAGATTTTCTTTTCTGTTTCTCTCTCTCTCTCTCT
CTCTCTCTCTCCACTTCCATATCTTCAGAACGCCAGTGTTCA