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Marker Overview
Name | BNL4108 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL4108_orig
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Source Type | genomic |
Repeat Motif | (GA)31 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL4108_F: TCCACCATTCCCGTAAATGT |
Primer 2 | BNL4108_R: TGGCCAAGTCATTAGGCTTT |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch06_At.06 | N/A | 80.7 | BNL4108 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch06_At.06 | N/A | 148 | BNL4108 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch06_At.06 | N/A | 64.15 | BNL4108 | View |
4 | AD-genome wide Reference Map (2009) | AD_ch06_At.06 | N/A | 139 | BNL4108 | View |
5 | TM-1 x 3-79, RIL (2012) | AD_ch06_At.06 | N/A | 56.75 | BNL4108 | View |
6 | Yumian-1 x T586, F2:3 (2005) | AD_ch06_At.06 | N/A | 10.2 | BNL4108 | View |
7 | Yumian-1 x T586, F2:7 (2008) | AD_ch06_At.06 | N/A | 12.8 | BNL4108 | View |
8 | Yumian-1 x T586, RIL (2006) | AD_ch06_At.06 | N/A | 16.8 | BNL4108 | View |
9 | DH962 x Jinmian-6, F2 (2009) | AD_ch06_At.06 | N/A | 182.2 | BNL4108 | View |
10 | DH962 x Jinmian-6, F2 (2009) | AD_ch06_At.06 | N/A | 182.2 | BNL4108 | View |
11 | Yumian-1 x T586, RIL (2015) | AD_ch06_At.06 | N/A | 71.7 | BNL4108 | View |
12 | DH962 X Ji Mian 5, F2 (2015) | AD_ch06_At.06 | N/A | 31.59 | BNL4108 | View |
13 | TM-1 x 3-79, RIL (2014) | AD_ch06_At.06 | N/A | 56.7 | BNL4108 | View |
14 | DH962 x Ji Mian 5, RIL (2015) | AD_ch06_At.06 | N/A | 34.5 | BNL4108 | View |
15 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch06_At.06 | N/A | 72.7 | BNL4108 | View |
16 | SG 747 x Giza 75, BIL (2013) | AD_ch06_At.06 | N/A | 47.3 | BNL4108 | View |
17 | Monsanto SSR Bin Map, (2009) | AD_ch06_At.06 | N/A | 61 | BNL4108 | View |
18 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch06_At.06 | N/A | 0.7 | BNL4108-180 | View |
19 | TM-1 x Hai-7124, BC1 (2007) | AD_ch06_At.06 | N/A | 95.3 | BNL4108-180 | View |
20 | TM-1 x Hai-7124, BC1 (2008) | AD_ch06_At.06 | N/A | 61.46 | BNL4108-180 | View |
21 | TM-1 x Hai-7124, BC1 (2012) | AD_ch06_At.06 | N/A | 59.5 | BNL4108-180 | View |
22 | Yumian-1 x T586, RIL (2009) | AD_ch06_At.06 | N/A | 12.4 | BNL4108/170t(C6) | View |
23 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch06_At.06 | N/A | 10.2 | BNL4108(C6) | View |
24 | TM-1 x 3-79, RIL (2012.v3) | AD_ch06_At.06 | N/A | 56.75 | BNL4108 | View |
Sequence
>BNL4108 ID=BNL4108; Name=BNL4108; organism=Gossypium hirsutum; type=genetic_marker; length=163bp TCCACCATTCCCGTAAATGTTAACATCCCAAACTATTGAACCAACAAATT GGCAAGTTTTATGGTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAAAGAAATACATAGTGAAATAGCTTAAAGCCT AATGACTTGGCCA
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