BNL4108, BNL4108 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL4108
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL4108_orig
Source Typegenomic
Repeat Motif(GA)31
PCR ConditionAnnealing temperature: 55
Primer 1BNL4108_F: TCCACCATTCCCGTAAATGT
Primer 2BNL4108_R: TGGCCAAGTCATTAGGCTTT
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90obsolete_cultivar
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
BNL4108_FBNL4108_FGossypium hirsutumprimer
BNL4108_RBNL4108_RGossypium hirsutumprimer


This genetic_marker is adjacent to the following QTL feature(s):

Feature NameUnique NameSpeciesType
boll numberqBN.DJiM-RIL_ch06.h13.1Gossypium hirsutumQTL
boll numberqBN.DJiM-RIL_ch06.h13.2Gossypium hirsutumQTL
lint percentqLP.DJiM-RIL_ch06.h12.2Gossypium hirsutumQTL


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
BNL4108BNL4108Gossypium hirsutummarker_locus
BNL4108-180BNL4108-180Gossypium hirsutummarker_locus
BNL4108/170t(C6)BNL4108/170t(C6)Gossypium hirsutummarker_locus
BNL4108(C6)BNL4108(C6)Gossypium hirsutummarker_locus
BNL4108BNL4108-56.748Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL4108_origBNL4108_origGossypium hirsutumsequence_feature


Sequence
>BNL4108 ID=BNL4108|Name=BNL4108|organism=Gossypium hirsutum|type=genetic_marker|length=163bp
TCCACCATTCCCGTAAATGTTAACATCCCAAACTATTGAACCAACAAATT
GGCAAGTTTTATGGTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAAAGAAATACATAGTGAAATAGCTTAAAGCCT
AATGACTTGGCCA
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocus
1CCRI-36 x Hai-7124, F2 (2007)CCRI-36 x Hai-7124, F2 (2007).CH-F2_chr06N/AAD_chr.0680.7BNL4108
2Guazuncho-2 x VH8-4602, BC1 (2005)Guazuncho-2 x VH8-4602, BC1 (2005).GV-BC1_chr06N/AAD_chr.06148BNL4108
3Guazuncho-2 x VH8-4602, consensus (2009)Guazuncho-2 x VH8-4602, consensus (2009).GV-cons_c06N/AAD_chr.0664.15BNL4108
4Monsanto SSR Bin Map, (2009)Monsanto SSR Bin Map, (2009).BIN-SSR_chr06N/AAD_chr.0670BNL4108
5AD-genome wide Reference Map (2009)AD-genome wide Reference Map (2009).Ref-chr06N/AAD_chr.06139BNL4108
6TM-1 x 3-79, RIL (2012)TM-1 x 3-79, RIL (2012).T3-RIL.12_c06N/AAD_chr.0656.75BNL4108
7Yumian-1 x T586, F2:3 (2005)Yumian-1 x T586, F2:3 (2005).YT-F2:3_chr06.1N/AAD_chr.0610.2BNL4108
8Yumian-1 x T586, F2:7 (2008)Yumian-1 x T586, RIL (2008).YT-RIL_chr06.1N/AAD_chr.0612.8BNL4108
9Yumian-1 x T586, RIL (2006)YT-RIL_chr06-3N/AAD_chr.0616.8BNL4108
10DH962 x Jinmian-6, F2 (2009)DJ-F2_chr06.1N/AAD_chr.06182.2BNL4108
11DH962 x Jinmian-6, F2 (2009)DJ-F2_chr06/LG2N/AAD_chr.06182.2BNL4108
12Yumian-1 x T586, RIL (2015)YT-RIL.15_chr06N/AAD_chr.0671.7BNL4108
13DH962 X Ji Mian 5, F2 (2015)DJiM-F2_chr06N/AAD_chr.0631.59BNL4108
14TM-1 x 3-79, RIL (2014)T3-RIL.14_chr06N/AAD_chr.0656.7BNL4108
15DH962 x Ji Mian 5, RIL (2015)DJiM-RIL_chr06N/AAD_chr.0634.5BNL4108
16CCRI 12-4 x (AD)5-7, F2 (2015)CAD5-F2_chr06N/AAt.0672.7BNL4108
17SG 747 x Giza 75, BIL (2013)SG-BIL_chr06N/AAD_chr.0647.3BNL4108
18Vsg x (TM-1 x Hai-7124), DH (2005)Vsg x (TM-1 x Hai-7124), DH (2005).VTH-DH.05_chr06.3N/AAD_chr.060.7BNL4108-180
19TM-1 x Hai-7124, BC1 (2007)TM-1 x Hai-7124, BC1 (2007).TH-BC1_chr06N/AAD_chr.0695.3BNL4108-180
20TM-1 x Hai-7124, BC1 (2008)TM-1 x Hai-7124, BC1 (2008).TH-BC1.08_chr06/A6N/AAD_chr.0661.46BNL4108-180
21Yumian-1 x T586, RIL (2009)YT-RIL_chr06-2N/AAD_chr.0612.4BNL4108/170t(C6)
22Yumian-1 x T586, F2:3 (2005.v0)YT-F2:3_chr06-1N/AAD_chr.0610.2BNL4108(C6)
23TM-1 x 3-79, RIL (2012.v3)T3-RIL.12v3_chr.06N/AAD_chr.0656.75BNL4108