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Marker Overview
| Name | BNL4094 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL4094_orig
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| Source Type | genomic |
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| Repeat Motif | (GA)15 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL4094_F: ATGCTGCGGAGTCGATATCT |
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| Primer 2 | BNL4094_R: AAATTGATTTCATGCCGGAG |
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| Polymorphism | P_ BNL4094 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Image
| File Name | Legend |
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| 48_FISH_TAG-115-675.jpg | Twenty-six individual cotton mitotic chromosomes with FISH signals derived from the chromosome-speciWc BACs, and comparisons of linkage and FISH maps. [Image from Wang 2007, TAG-115-675] |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch11_At.11 | N/A | 114.9 | BNL4094 | View |
| 2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch11_At.11 | N/A | 114.9 | BNL4094 | View |
| 3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch11_At.11 | N/A | 100.61 | BNL4094 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 117 | BNL4094 | View |
| 5 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch11_At.11 | N/A | 64.2 | BNL4094 | View |
| 6 | Emian-22 x 3-79, BC1 (2011) | AD_ch11_At.11 | N/A | 115.14 | BNL4094 | View |
| 7 | NemX x SJ-2, RIL (2005) | AD_ch11_At.11 | N/A | 237.2 | BNL4094 | View |
| 8 | Monsanto SSR Bin Map, (2009) | AD_ch11_At.11 | N/A | 81 | BNL4094 | View |
| 9 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch11_At.11 | N/A | 242.1 | BNL4094* | View |
| 10 | TM-1 x Hai-7124, BC1 (2007) | AD_ch11_At.11 | N/A | 85.2 | BNL4094-190 | View |
| 11 | TM-1 x Hai-7124, BC1 (2008) | AD_ch11_At.11 | N/A | 83.74 | BNL4094-190 | View |
| 12 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch11_At.11 | N/A | 107 | BNL4094-190 | View |
| 13 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 80.3 | BNL4094-190 | View |
| 14 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch11_At.11 | N/A | 132.9 | BNL4094 | View |
Sequence
>BNL4094 ID=BNL4094; Name=BNL4094; organism=Gossypium hirsutum; type=genetic_marker; length=183bp
ATGCTGCGGAGTCGATATCTAGAAACCTGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAAATTTATTAAATTTTCTGAAATTTGGAATGTCNAAAGAAAGA
ATTCGAGATCCTAAAATTGATCGTGTTCGAATTCAAGAAATTCANATAAA
ACAGAAAAGGCAACTCCGGCATGAAATCAATTT
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