|
|
Marker Overview
| Name | BNL4082 |
|---|
| Genbank ID | N/A |
|---|
| Type | SSR |
|---|
| Species | Gossypium hirsutum |
|---|
| Germplasm | Deltapine 90 |
|---|
| Source Sequence | BNL4082_orig
|
|---|
| Source Type | genomic |
|---|
| Repeat Motif | (GA)24 |
|---|
| PCR Condition | Annealing temperature: 55 |
|---|
| Primer 1 | BNL4082_F: GTAAAATGAAATAAAATAAAAGGAGAGA |
|---|
| Primer 2 | BNL4082_R: TTCAACACCGCCAAACATAA |
|---|
| Polymorphism | P_ BNL4082 |
|---|
| Comment | Primer data obtained in 2000 |
|---|
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch15_Dt.01 | N/A | 69.4 | BNL4082 | View |
| 2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch15_Dt.01 | N/A | 91 | BNL4082 | View |
| 3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch15_Dt.01 | N/A | 53.7 | BNL4082 | View |
| 4 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch07_At.07 | N/A | 94.7 | BNL4082 | View |
| 5 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 68.83 | BNL4082 | View |
| 6 | Yumian-1 x T586, F2:3 (2005) | AD_ch15_Dt.01 | N/A | 8.3 | BNL4082 | View |
| 7 | Emian-22 x 3-79, BC1 (2011) | AD_ch15_Dt.01 | N/A | 109.29 | BNL4082 | View |
| 8 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 122 | BNL4082 | View |
| 9 | Yumian-1 x T586, RIL (2006) | AD_ch15_Dt.01 | N/A | 44 | BNL4082 | View |
| 10 | Yumian-1 x T586, RIL (2015) | AD_ch15_Dt.01 | N/A | 72.1 | BNL4082 | View |
| 11 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 51 | BNL4082 | View |
| 12 | CCRI-36 x G2005, RIL (2016) | AD_ch15_Dt.01 | N/A | 124.73 | BNL4082 | View |
| 13 | Monsanto SSR Bin Map, (2009) | AD_ch15_Dt.01 | N/A | 41 | BNL4082 | View |
| 14 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch15_Dt.01 | N/A | 44.1 | BNL4082b | View |
| 15 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch26_Dt.12 | N/A | 47.4 | BNL4082b | View |
| 16 | TM-1 x Hai-7124, BC1 (2007) | AD_ch15_Dt.01 | N/A | 63.5 | BNL4082-175 | View |
| 17 | TM-1 x Hai-7124, BC1 (2008) | AD_ch15_Dt.01 | N/A | 61.42 | BNL4082-175 | View |
| 18 | TM-1 x Hai-7124, BC1 (2012) | AD_ch15_Dt.01 | N/A | 63.1 | BNL4082-175 | View |
| 19 | Yumian-1 x T586, RIL (2009) | AD_ch15_Dt.01 | N/A | 44 | BNL4082/180y(C15) | View |
| 20 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch15_Dt.01 | N/A | 8.3 | BNL4082(C15) | View |
| 21 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch15_Dt.01 | N/A | 63.6 | BNL4082a | View |
| 22 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 50.99 | BNL4082 | View |
Sequence
>BNL4082 ID=BNL4082; Name=BNL4082; organism=Gossypium hirsutum; type=genetic_marker; length=173bp
GTAAAATGAAATAAAATAAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAAAGCTTTATTCAAATGTCAAAGCAAAAAGA
GAAAAATAAATACTCAAGATATTGAGAAGTCTTGTTGGGAATAAAGTTTC
AAATTATGTTTGGCGGTGTTGAA
|
