BNL3992, BNL3992 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL3992
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL3992_orig
Source Typegenomic
Repeat Motif(TC)26, (GA)26
PCR ConditionAnnealing temperature: 55
Primer 1BNL3992_F: CAGAAGAGGAGGAGGTGGAG
Primer 2BNL3992_R: TGCCAATGATGGAAAACTCA
PolymorphismP_ BNL3992
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3992_origBNL3992_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch05_At.05N/A153.27BNL3992View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch05_At.05N/A167.7BNL3992View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch05_At.05N/A47.34BNL3992View
4Palmeri x K-101, F2 (2007)AD_ch05_At.05N/A117.3BNL3992View
5AD-genome wide Reference Map (2009)AD_ch05_At.05N/A136BNL3992View
6TM-1 x 3-79, RIL (2006)AD_ch05_At.05N/A65.3BNL3992View
7Xinluzao-1 x Hai-7124, F2 (2008)AD_ch19_Dt.05N/A16.6BNL3992View
8Yumian-1 x T586, F2:7 (2008)AD_ch05_At.05N/A45.2BNL3992View
9Yumian-1 x T586, F2:3 (2005)AD_ch05_At.05N/A26.3BNL3992View
10CCRI-36 x Hai-7124, F2 (2007)AD_ch05_At.05N/A123.4BNL3992View
11AD-genome wide Reference Map (2009)AD_ch19_Dt.05N/A245BNL3992View
12TM-1 x 3-79, RIL (2012)AD_ch05_At.05N/A90.08BNL3992View
13Yumian-1 x T586, RIL (2006)AD_ch05_At.05N/A63.7BNL3992View
14Yumian-1 x T586, RIL (2015)AD_ch05_At.05N/A76.5BNL3992View
15TM-1 x 3-79, RIL (2014)AD_ch05_At.05N/A112.6BNL3992View
16W10 x TM-1, F2:3 (2015)AD_ch05_At.05N/A44.6BNL3992View
17CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch05_At.05N/A129.3BNL3992View
18SG 747 x Giza 75, BIL (2013)AD_ch05_At.05N/A91.1BNL3992View
19Monsanto SSR Bin Map, (2009)AD_ch05_At.05N/A101BNL3992View
20TM-1 x Hai-7124, BC1 (2007)AD_ch05_At.05N/A108.2BNL3992-155View
21TM-1 x Hai-7124, BC1 (2008)AD_ch05_At.05N/A95.8BNL3992-155View
22Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch05_At.05N/A0BNL3992-155View
23TM-1 x Hai-7124, BC1 (2005.v0)AD_ch05_At.05N/A13.1BNL3992-155View
24TM-1 x Hai-7124, BC1 (2012)AD_ch05_At.05N/A108.2BNL3992-155View
25Yumian-1 x T586, RIL (2009)AD_ch05_At.05N/A63.7BNL3992/150t(C5)View
26Yumian-1 x T586, F2:3 (2005.v0)AD_ch05_At.05N/A26.3BNL3992(C5)View
27TM-1 x 3-79, RIL (2012.v3)AD_ch05_At.05N/A112.58BNL3992View
28PD 94042 x (AD)4-08, F2 (2016)AD_ch05_At.05N/A160.2BNL3992View
Sequence
>BNL3992 ID=BNL3992; Name=BNL3992; organism=Gossypium hirsutum; type=genetic_marker; length=155bp
CAGAAGAGGAGGAGGTGGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAACGAAAGGAGGTGGAGTGCAAAAGCCAG
AGATGAATCAAAAAACAGAACCATCCAATCAAAGATGAGTTTTCCATCAT
TGGCA