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Marker Overview
Name | BNL3992 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL3992_orig
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Source Type | genomic |
Repeat Motif | (TC)26, (GA)26 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL3992_F: CAGAAGAGGAGGAGGTGGAG |
Primer 2 | BNL3992_R: TGCCAATGATGGAAAACTCA |
Polymorphism | P_ BNL3992 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch05_At.05 | N/A | 153.27 | BNL3992 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch05_At.05 | N/A | 167.7 | BNL3992 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch05_At.05 | N/A | 47.34 | BNL3992 | View |
4 | Palmeri x K-101, F2 (2007) | AD_ch05_At.05 | N/A | 117.3 | BNL3992 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch05_At.05 | N/A | 136 | BNL3992 | View |
6 | TM-1 x 3-79, RIL (2006) | AD_ch05_At.05 | N/A | 65.3 | BNL3992 | View |
7 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch19_Dt.05 | N/A | 16.6 | BNL3992 | View |
8 | Yumian-1 x T586, F2:7 (2008) | AD_ch05_At.05 | N/A | 45.2 | BNL3992 | View |
9 | Yumian-1 x T586, F2:3 (2005) | AD_ch05_At.05 | N/A | 26.3 | BNL3992 | View |
10 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch05_At.05 | N/A | 123.4 | BNL3992 | View |
11 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 245 | BNL3992 | View |
12 | TM-1 x 3-79, RIL (2012) | AD_ch05_At.05 | N/A | 90.08 | BNL3992 | View |
13 | Yumian-1 x T586, RIL (2006) | AD_ch05_At.05 | N/A | 63.7 | BNL3992 | View |
14 | Yumian-1 x T586, RIL (2015) | AD_ch05_At.05 | N/A | 76.5 | BNL3992 | View |
15 | TM-1 x 3-79, RIL (2014) | AD_ch05_At.05 | N/A | 112.6 | BNL3992 | View |
16 | W10 x TM-1, F2:3 (2015) | AD_ch05_At.05 | N/A | 44.6 | BNL3992 | View |
17 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch05_At.05 | N/A | 129.3 | BNL3992 | View |
18 | SG 747 x Giza 75, BIL (2013) | AD_ch05_At.05 | N/A | 91.1 | BNL3992 | View |
19 | Monsanto SSR Bin Map, (2009) | AD_ch05_At.05 | N/A | 101 | BNL3992 | View |
20 | TM-1 x Hai-7124, BC1 (2007) | AD_ch05_At.05 | N/A | 108.2 | BNL3992-155 | View |
21 | TM-1 x Hai-7124, BC1 (2008) | AD_ch05_At.05 | N/A | 95.8 | BNL3992-155 | View |
22 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch05_At.05 | N/A | 0 | BNL3992-155 | View |
23 | TM-1 x Hai-7124, BC1 (2005.v0) | AD_ch05_At.05 | N/A | 13.1 | BNL3992-155 | View |
24 | TM-1 x Hai-7124, BC1 (2012) | AD_ch05_At.05 | N/A | 108.2 | BNL3992-155 | View |
25 | Yumian-1 x T586, RIL (2009) | AD_ch05_At.05 | N/A | 63.7 | BNL3992/150t(C5) | View |
26 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch05_At.05 | N/A | 26.3 | BNL3992(C5) | View |
27 | TM-1 x 3-79, RIL (2012.v3) | AD_ch05_At.05 | N/A | 112.58 | BNL3992 | View |
28 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch05_At.05 | N/A | 160.2 | BNL3992 | View |
Sequence
>BNL3992 ID=BNL3992; Name=BNL3992; organism=Gossypium hirsutum; type=genetic_marker; length=155bp CAGAAGAGGAGGAGGTGGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAACGAAAGGAGGTGGAGTGCAAAAGCCAG AGATGAATCAAAAAACAGAACCATCCAATCAAAGATGAGTTTTCCATCAT TGGCA
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