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Marker Overview
| Name | BNL3875 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3875_orig
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| Source Type | genomic |
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| Repeat Motif | (TG)13 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3875_F: CATGTAGGAACGAGCATAGTG |
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| Primer 2 | BNL3875_R: AACACATACCAGTCCCAGTCG |
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| Polymorphism | P_ BNL3875 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Emian-22 x 3-79, BC1 (2011) | AD_ch19_Dt.05 | N/A | 107.56 | BNL3875 | View |
| 2 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 90.12 | BNL3875 | View |
| 3 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch19_Dt.05 | N/A | 229.4 | BNL3875 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 143 | BNL3875 | View |
| 5 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch19_Dt.05 | N/A | 72.4 | BNL3875 | View |
| 6 | DH962 x Jinmian-6, F2 (2009) | AD_ch19_Dt.05 | N/A | 22 | BNL3875 | View |
| 7 | DH962 x Jinmian-6, F2 (2009) | AD_ch19_Dt.05 | N/A | 22 | BNL3875 | View |
| 8 | DH962 X Ji Mian 5, F2 (2015) | AD_ch19_Dt.05 | N/A | 50.47 | BNL3875 | View |
| 9 | TM-1 x 3-79, RIL (2014) | AD_ch19_Dt.05 | N/A | 96.2 | BNL3875 | View |
| 10 | DH962 x Ji Mian 5, RIL (2015) | AD_ch19_Dt.05 | N/A | 62.9 | BNL3875 | View |
| 11 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch19_Dt.05 | N/A | 111.3 | BNL3875 | View |
| 12 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch19_Dt.05 | N/A | 72.8 | BNL3875 | View |
| 13 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch11_At.11 | N/A | 0 | BNL3875-132 | View |
| 14 | Monsanto SSR Bin Map, (2009) | AD_ch19_Dt.05 | N/A | 161 | BNL3875b | View |
| 15 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch19_Dt.05 | N/A | 82.8 | BNL3875 | View |
| 16 | TM-1 x 3-79, RIL (2012.v3) | AD_ch19_Dt.05 | N/A | 96.21 | BNL3875 | View |
| 17 | MGG-293-793, MAGIC (2018) | AD_ch19_Dt.05 | N/A | 125.8 | BNL3875 | View |
Sequence
>BNL3875 ID=BNL3875; Name=BNL3875; organism=Gossypium hirsutum; type=genetic_marker; length=135bp
CATGTAGGAACGAGCATAGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGT
GTTTGTTTGATGGTTTTACAGCTCCACTTCACAGGGTCTGTTTAGCTTTC
TCCTTTTGGTACTGCGACTGGGACTGGTATGTGTT
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