BNL3492, BNL3492 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL3492
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL3492_orig
Source Typegenomic
Repeat Motif(CT)10+(CA)13
PCR ConditionAnnealing temperature: 55
Primer 1BNL3492_F: CCAGTCAGGTTGTTGGGATC
Primer 2BNL3492_R: TGGAAGCAGTGGCAATAACA
PolymorphismP_ BNL3492
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3492_origBNL3492_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch14_Dt.02N/A10.4BNL3492View
2AD-genome wide Reference Map (2009)AD_ch14_Dt.02N/A90BNL3492View
3AD-genome wide Reference Map (2009)AD_ch05_At.05N/A69BNL3492View
4AD-genome wide Reference Map (2009)AD_ch19_Dt.05N/A104BNL3492View
5(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch05_At.05N/A43.8BNL3492View
6PD6992 x SM3, F2:3 (2005)AD_ch14_Dt.02N/A0BNL3492View
7Emian-22 x 3-79, BC1 (2011)AD_ch05_At.05N/A99.64BNL3492bView
8Yumian-1 x 7235, RIL (2015)AD_ch05_At.05N/A19.5BNL3492bView
9Emian-22 x 3-79, BC1 (2011)AD_ch19_Dt.05N/A160.9BNL3492aView
10Yumian-1 x 7235, RIL (2015)AD_ch24_Dt.08N/A30.5BNL3492aView
11Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch14_Dt.02N/A31.3BNL3492-140View
12PD 94042 x (AD)4-08, F2 (2016)AD_ch19_Dt.05N/A79.2BNL3492View
Sequence
>BNL3492 ID=BNL3492; Name=BNL3492; organism=Gossypium hirsutum; type=genetic_marker; length=250bp
CCAGTCAGGTTGTTGGGATCTACGTCCTAATTCGTAACTGTTATGATATT
GTCATTTAGTTTAATTCTTCTAATTTTTTATTTCTCATCTTTTTTTTAAT
ATATATATATATTTATAAGTTAAAGCACTCTCTCTCTCTCTCTCTCTCAC
ACACACACACACACACACACACACTCACTCACTCACTTATAATCATTCAC
CACTTCAAGAAATGAGTAATAACTACTTTATGTTATTGCCACTGCTTCCA