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Marker Overview
| Name | BNL3463 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3463_orig
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| Source Type | genomic |
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| Repeat Motif | (AC)10 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3463_F: GCACTCATTCAGTCAAGGCA |
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| Primer 2 | BNL3463_R: TGCCAATGTGGCATCAAC |
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| Polymorphism | P_ BNL3463 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch03_At.03 | N/A | 30.1 | BNL3463 | View |
| 2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch03_At.03 | N/A | 66.74 | BNL3463 | View |
| 3 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch03_At.03 | N/A | 46.21 | BNL3463 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 117 | BNL3463 | View |
| 5 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 42.49 | BNL3463 | View |
| 6 | Yumian-1 x T586, RIL (2006) | AD_ch03_At.03 | N/A | 6.6 | BNL3463 | View |
| 7 | Yumian-1 x T586, RIL (2015) | AD_ch03_At.03 | N/A | 37 | BNL3463 | View |
| 8 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 73.9 | BNL3463 | View |
| 9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch03_At.03 | N/A | 83 | BNL3463 | View |
| 10 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch26_Dt.12 | N/A | 104.8 | BNL3463 | View |
| 11 | Monsanto SSR Bin Map, (2009) | AD_ch03_At.03 | N/A | 141 | BNL3463 | View |
| 12 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch03_At.03 | N/A | 59.3 | BNL3463-240 | View |
| 13 | Yumian-1 x T586, RIL (2009) | AD_ch03_At.03 | N/A | 6.6 | BNL3463/240y | View |
| 14 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch26_Dt.12 | N/A | 52.82 | BNL3463 | View |
| 15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 73.88 | BNL3463 | View |
Sequence
>BNL3463 ID=BNL3463; Name=BNL3463; organism=Gossypium hirsutum; type=genetic_marker; length=232bp
GCACTCATTCAGTCAAGGCAAGTATTAATATGTTTAAGAGATGAGTGTTT
ATAAGAGGGTGTTTAATCTTTTGGTTATAGAACTAATCAAGGGTCTTGAT
TGAATATAGGTTGGTGGTCGTGGTTTTCGGCGCGTTCTCATAAACAGGTG
TGTGTGTGTGTGTGTGTAAAATACTGCCATTACCGTAAATAAAAAAAAGC
CAAAAAATAGGACCGTTGATGCCACATTGGCA
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