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Marker Overview
| Name | BNL3424 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3424_orig
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| Source Type | genomic |
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| Repeat Motif | (CA)14 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3424_F: TGTGCCGTCTCAAAATGAAG |
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| Primer 2 | BNL3424_R: AAGACCAATCTGTTGCCAGC |
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| Polymorphism | P_ BNL3424 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch02_At.02 | N/A | 0 | BNL3424b | View |
| 2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch17_Dt.03 | N/A | 166.7 | BNL3424a | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch02_At.02 | N/A | 2 | BNL3424 | View |
| 4 | TM-1 x 3-79, RIL (2006) | AD_ch02_At.02 | N/A | 13 | BNL3424 | View |
| 5 | TM-1 x 3-79, RIL (2012) | AD_ch02_At.02 | N/A | 0 | BNL3424 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch17_Dt.03 | N/A | 170 | BNL3424 | View |
| 7 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch02_At.02 | N/A | 24.1 | BNL3424 | View |
| 8 | TM-1 x 3-79, RIL (2014) | AD_ch02_At.02 | N/A | 0 | BNL3424 | View |
| 9 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch02_At.02 | N/A | 20.6 | BNL3424 | View |
| 10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch02_At.02 | N/A | 176.4 | BNL3424 | View |
| 11 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch06_At.06 | N/A | 92.5 | BNL3424 | View |
| 12 | TM-1 x 3-79, RIL (2012.v3) | AD_ch02_At.02 | N/A | 0 | BNL3424 | View |
| 13 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch02_At.02 | N/A | 0 | BNL3424 | View |
| 14 | Monsanto SSR Bin Map, (2009) | AD_ch02_At.02 | N/A | 21 | BNL3424 | View |
| 15 | TM-1 x Hai-7124, BC1 (2008) | AD_ch02_At.02 | N/A | 112.64 | BNL3424-215 | View |
| 16 | TM-1 x Hai-7124, BC1 (2012) | AD_ch02_At.02 | N/A | 107.1 | BNL3424-215 | View |
Sequence
>BNL3424 ID=BNL3424; Name=BNL3424; organism=Gossypium hirsutum; type=genetic_marker; length=153bp
TGTGCCGTCTCAAAATGAAGACCAAGTCCAAAATAACATGCAAAAGTTCA
GGCAACAACCACACACACACACACACACACACACACAATATGTGTCTCTA
TATATATTATGCTGGTGTTTGAAAATAAGTTTTGCTGGCAACAGATTGGT
CTT
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