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Marker Overview
Name | BNL3347 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL3347_orig
|
Source Type | genomic |
Repeat Motif | (GA)22, (CT)23 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL3347_F: AGACTGACATGCAGCTTCCA |
Primer 2 | BNL3347_R: ATCTTAATTTTGAGTATAGGATAGGGG |
Polymorphism | P_ BNL3347 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch19_Dt.05 | N/A | 0 | BNL3347 | View |
2 | 7235 x TM-1, RIL (2007) | AD_ch19_Dt.05 | N/A | 22.2 | BNL3347 | View |
3 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch19_Dt.05 | N/A | 13.1 | BNL3347 | View |
4 | Emian-22 x 3-79, BC1 (2011) | AD_ch19_Dt.05 | N/A | 41.56 | BNL3347 | View |
5 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch19_Dt.05 | N/A | 219.5 | BNL3347 | View |
6 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch19_Dt.05 | N/A | 162.95 | BNL3347 | View |
7 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch02_At.02 | N/A | 41.42 | BNL3347 | View |
8 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch02_At.02 | N/A | 33.32 | BNL3347 | View |
9 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch19_Dt.05 | N/A | 55.54 | BNL3347 | View |
10 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 294 | BNL3347 | View |
11 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 138.35 | BNL3347 | View |
12 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch19_Dt.05 | N/A | 109.3 | BNL3347 | View |
13 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch19_Dt.05 | N/A | 251.3 | BNL3347 | View |
14 | 7235 x TM-1, F2:3 (2005) | AD_ch19_Dt.05 | N/A | 38.7 | BNL3347 | View |
15 | TM-1 x 3-79, RIL (2014) | AD_ch19_Dt.05 | N/A | 48.3 | BNL3347 | View |
16 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch19_Dt.05 | N/A | 140.4 | BNL3347 | View |
17 | Emian-22 x 3-79, BC1 (2015) | AD_ch19_Dt.05 | N/A | 43.2 | BNL3347 | View |
18 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch19_Dt.05 | N/A | 38.5 | BNL3347 | View |
19 | Monsanto SSR Bin Map, (2009) | AD_ch19_Dt.05 | N/A | 81 | BNL3347 | View |
20 | Deltapine-61 x Texas-701, F2 (2007) | AD_ch19_Dt.05 | N/A | 14.1 | BNL3347-109 | View |
21 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch19_Dt.05 | N/A | 16.2 | BNL3347-140 | View |
22 | TM-1 x Hai-7124, BC1 (2007) | AD_ch19_Dt.05 | N/A | 146.5 | BNL3347-140 | View |
23 | TM-1 x Hai-7124, BC1 (2008) | AD_ch19_Dt.05 | N/A | 145.39 | BNL3347-140 | View |
24 | TM-1 x Hai-7124, BC1 (2012) | AD_ch19_Dt.05 | N/A | 46 | BNL3347-140 | View |
25 | TM-1 x 3-79, RIL (2011) | AD_ch19_Dt.05 | N/A | 33.7 | BNL3347_177/170 | View |
26 | TM-1 x 3-79, RIL (2012.v3) | AD_ch19_Dt.05 | N/A | 48.26 | BNL3347 | View |
27 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch19_Dt.05 | N/A | 201.2 | BNL3347 | View |
28 | MGG-293-793, MAGIC (2018) | AD_ch19_Dt.05 | N/A | 43.2 | BNL3347 | View |
Sequence
>BNL3347 ID=BNL3347; Name=BNL3347; organism=Gossypium hirsutum; type=genetic_marker; length=141bp AGACTGACATGCAGCTTCCAGTTTTGCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTGCCTCTGCATTATATAGGAAAATGGTCA TTTTTCAAGTTTAGCCCCTATCCTATACTCAAAATTAAGAT
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