BNL3347, BNL3347 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL3347
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL3347_orig
Source Typegenomic
Repeat Motif(GA)22, (CT)23
PCR ConditionAnnealing temperature: 55
Primer 1BNL3347_F: AGACTGACATGCAGCTTCCA
Primer 2BNL3347_R: ATCTTAATTTTGAGTATAGGATAGGGG
PolymorphismP_ BNL3347
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3347_origBNL3347_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch19_Dt.05N/A0BNL3347View
27235 x TM-1, RIL (2007)AD_ch19_Dt.05N/A22.2BNL3347View
3CCRI-36 x Hai-7124, F2 (2007)AD_ch19_Dt.05N/A13.1BNL3347View
4Emian-22 x 3-79, BC1 (2011)AD_ch19_Dt.05N/A41.56BNL3347View
5Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch19_Dt.05N/A219.5BNL3347View
6Guazuncho-2 x VH8-4602, consensus (2009)AD_ch19_Dt.05N/A162.95BNL3347View
7Guazuncho-2 x VH8-4602, consensus (2009)AD_ch02_At.02N/A41.42BNL3347View
8Guazuncho-2 x VH8-4602, RIL (2009)AD_ch02_At.02N/A33.32BNL3347View
9Guazuncho-2 x VH8-4602, RIL (2009)AD_ch19_Dt.05N/A55.54BNL3347View
10AD-genome wide Reference Map (2009)AD_ch19_Dt.05N/A294BNL3347View
11TM-1 x 3-79, RIL (2012)AD_ch19_Dt.05N/A138.35BNL3347View
12Xinluzao-1 x Hai-7124, F2 (2008)AD_ch19_Dt.05N/A109.3BNL3347View
13Handan-208 x Pima-90, F2:3 (2007)AD_ch19_Dt.05N/A251.3BNL3347View
147235 x TM-1, F2:3 (2005)AD_ch19_Dt.05N/A38.7BNL3347View
15TM-1 x 3-79, RIL (2014)AD_ch19_Dt.05N/A48.3BNL3347View
16TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch19_Dt.05N/A140.4BNL3347View
17Emian-22 x 3-79, BC1 (2015)AD_ch19_Dt.05N/A43.2BNL3347View
18CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch19_Dt.05N/A38.5BNL3347View
19Monsanto SSR Bin Map, (2009)AD_ch19_Dt.05N/A81BNL3347View
20Deltapine-61 x Texas-701, F2 (2007)AD_ch19_Dt.05N/A14.1BNL3347-109View
21Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch19_Dt.05N/A16.2BNL3347-140View
22TM-1 x Hai-7124, BC1 (2007)AD_ch19_Dt.05N/A146.5BNL3347-140View
23TM-1 x Hai-7124, BC1 (2008)AD_ch19_Dt.05N/A145.39BNL3347-140View
24TM-1 x Hai-7124, BC1 (2012)AD_ch19_Dt.05N/A46BNL3347-140View
25TM-1 x 3-79, RIL (2011)AD_ch19_Dt.05N/A33.7BNL3347_177/170View
26TM-1 x 3-79, RIL (2012.v3)AD_ch19_Dt.05N/A48.26BNL3347View
27PD 94042 x (AD)4-08, F2 (2016)AD_ch19_Dt.05N/A201.2BNL3347View
28MGG-293-793, MAGIC (2018)AD_ch19_Dt.05N/A43.2BNL3347View
Sequence
>BNL3347 ID=BNL3347; Name=BNL3347; organism=Gossypium hirsutum; type=genetic_marker; length=141bp
AGACTGACATGCAGCTTCCAGTTTTGCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTGCCTCTGCATTATATAGGAAAATGGTCA
TTTTTCAAGTTTAGCCCCTATCCTATACTCAAAATTAAGAT