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Marker Overview
| Name | BNL3267 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3267_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)19 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3267_F: GTCAAACAGCAACAGGCAAA |
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| Primer 2 | BNL3267_R: CCAAATGTCCACCCTTTAGC |
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| Polymorphism | P_ BNL3267 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch14_Dt.02 | N/A | 79.5 | BNL3267 | View |
| 2 | Emian-22 x 3-79, BC1 (2011) | AD_ch03_At.03 | N/A | 83.79 | BNL3267 | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch14_Dt.02 | N/A | 47 | BNL3267 | View |
| 4 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch14_Dt.02 | N/A | 0 | BNL3267 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 56 | BNL3267 | View |
| 6 | LMY22 x LY343, RIL (2016) | chr.3 | N/A | 116.9 | BNL3267 | View |
| 7 | LMY22 x LY343, RIL (2020) | A03 | N/A | 84.03 | BNL3267 | View |
| 8 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch03_At.03 | N/A | 33 | BNL3267-161 | View |
| 9 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 66.45 | BNL3267b | View |
| 10 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 49.9 | BNL3267b | View |
| 11 | Monsanto SSR Bin Map, (2009) | AD_ch03_At.03 | N/A | 121 | BNL3267b | View |
| 12 | TM-1 x 3-79, RIL (2012) | AD_ch14_Dt.02 | N/A | 72.83 | BNL3267a | View |
| 13 | TM-1 x 3-79, RIL (2014) | AD_ch14_Dt.02 | N/A | 53.6 | BNL3267a | View |
| 14 | Monsanto SSR Bin Map, (2009) | AD_ch14_Dt.02 | N/A | 81 | BNL3267a | View |
| 15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 49.92 | BNL3267b | View |
| 16 | TM-1 x 3-79, RIL (2012.v3) | AD_ch14_Dt.02 | N/A | 53.59 | BNL3267a | View |
| 17 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch03_At.03 | N/A | 137.5 | BNL3267a | View |
| 18 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch17_Dt.03 | N/A | 225.7 | BNL3267b | View |
Sequence
>BNL3267 ID=BNL3267; Name=BNL3267; organism=Gossypium hirsutum; type=genetic_marker; length=164bp
GTCAAACAGCAACAGGCAAATGCATAAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAAACCTAATAGTTTGCAACAAACTCACCAGTAATCC
TTTGTCTGGGATCAAATGTTAACATCTTTTCAACAAGATCAATAGCTAAA
GGGTGGACATTTGG
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