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Marker Overview
Name | BNL3089 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL3089_orig
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Source Type | genomic |
Repeat Motif | (AG)10 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL3089_F: TCGAACTTAACAAAAGAGAGAGAGA |
Primer 2 | BNL3089_R: AAATCCGGATTCAGCAATACTT |
Polymorphism | P_ BNL3089 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | AD-genome wide Reference Map (2009) | AD_ch04_At.04 | N/A | 160 | BNL3089 | View |
2 | TM-1 x 3-79, RIL (2012) | AD_ch04_At.04 | N/A | 13.66 | BNL3089 | View |
3 | Emian-22 x 3-79, BC1 (2011) | AD_ch04_At.04 | N/A | 137.25 | BNL3089 | View |
4 | AD-genome wide Reference Map (2009) | AD_ch24_Dt.08 | N/A | 35 | BNL3089 | View |
5 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch04_At.04 | N/A | 0 | BNL3089 | View |
6 | DH962 x Jinmian-6, F2 (2009) | AD_ch04_At.04 | N/A | 0 | BNL3089 | View |
7 | DH962 x Jinmian-6, F2 (2009) | AD_ch04_At.04 | N/A | 0 | BNL3089 | View |
8 | Yumian-1 x 7235, RIL (2015) | AD_ch22_Dt.04 | N/A | 114 | BNL3089 | View |
9 | DH962 X Ji Mian 5, F2 (2015) | AD_ch04_At.04 | N/A | 79.86 | BNL3089 | View |
10 | TM-1 x 3-79, RIL (2014) | AD_ch04_At.04 | N/A | 15.2 | BNL3089 | View |
11 | W10 x TM-1, F2:3 (2015) | AD_ch04_At.04 | N/A | 0 | BNL3089 | View |
12 | DH962 x Ji Mian 5, RIL (2015) | AD_ch04_At.04 | N/A | 82.2 | BNL3089 | View |
13 | SG 747 x Giza 75, BIL (2013) | AD_ch04_At.04 | N/A | 0 | BNL3089 | View |
14 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch04_At.04 | N/A | 77.8 | BNL3089 | View |
15 | LMY22 x LY343, RIL (2020) | A04 | N/A | 0 | BNL3089 | View |
16 | TM-1 x Hai-7124, BC1 (2007) | AD_ch04_At.04 | N/A | 0 | BNL3089-125 | View |
17 | TM-1 x Hai-7124, BC1 (2008) | AD_ch04_At.04 | N/A | 3.54 | BNL3089-125 | View |
18 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch24_Dt.08 | N/A | 143.3 | BNL3089-125 | View |
19 | TM-1 x Hai-7124, BC1 (2012) | AD_ch04_At.04 | N/A | 102.7 | BNL3089-125 | View |
20 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch04_At.04 | N/A | 1.64 | BNL3089 | View |
21 | TM-1 x 3-79, RIL (2012.v3) | AD_ch04_At.04 | N/A | 15.2 | BNL3089 | View |
22 | MGG-293-793, MAGIC (2018) | AD_ch04_At.04 | N/A | 136.3 | BNL3089 | View |
Sequence
>BNL3089 ID=BNL3089; Name=BNL3089; organism=Gossypium hirsutum; type=genetic_marker; length=131bp TCGAACTTAACAAAAGAGAGAGAGAGAGAGAGAGAATAGAAGCCAAATTG ATTGAAAAAAATGTAAACCTTCACAACTATGCTTTGATTTATGGATCTAT TAGAGGCCTAAGTATTGCTGAATCCGGATTT
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