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Marker Overview
Name | BNL2967 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL2967_orig
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Source Type | genomic |
Repeat Motif | (GA)17, (TC)17 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL2967_F: GAAACTTCGGATGACTTTTGC |
Primer 2 | BNL2967_R: TCGACTAGGATCTATTTCAAGATG |
Polymorphism | P_ BNL2967 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Deltapine-61 x Texas-701, F2 (2007) | AD_ch12_At.12 | N/A | 0 | BNL2967-180 | View |
2 | Emian-22 x 3-79, BC1 (2011) | AD_ch12_At.12 | N/A | 61.49 | BNL2967 | View |
3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch12_At.12 | N/A | 142.6 | BNL2967 | View |
4 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch12_At.12 | N/A | 102.78 | BNL2967 | View |
5 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch12_At.12 | N/A | 55.73 | BNL2967 | View |
6 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch12_At.12 | N/A | 121.7 | BNL2967 | View |
7 | AD-genome wide Reference Map (2009) | AD_ch12_At.12 | N/A | 175 | BNL2967 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch12_At.12 | N/A | 47 | BNL2967 | View |
9 | SG 747 x Giza 75, BIL (2013) | AD_ch12_At.12 | N/A | 0 | BNL2967 | View |
10 | Monsanto SSR Bin Map, (2009) | AD_ch12_At.12 | N/A | 61 | BNL2967 | View |
11 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch12_At.12 | N/A | 35.4 | BNL2967* | View |
12 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch12_At.12 | N/A | 35.4 | BNL2967b | View |
13 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch12_At.12 | N/A | 112.6 | BNL2967 | View |
Sequence
>BNL2967 ID=BNL2967; Name=BNL2967; organism=Gossypium hirsutum; type=genetic_marker; length=185bp GAAACTTCGGATGACTTTTGCTTAAATTTGGTAAACTTTTCTGGAAATTT TGGAGACAATTTTGAGAGAGTAAAAGTTTAGATATATTCTCTAATATGTG GTCTATGAAAATGACCAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAATGTAACATCTTGAAATAGATCCTAGTCGA
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