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Marker Overview
| Name | BNL2609 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL2609_orig
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| Source Type | genomic |
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| Repeat Motif | (GA)16 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL2609_F: GTTCCCATGCATGCTTTCTT |
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| Primer 2 | BNL2609_R: ATAGCAGTGCAAGCAACGTG |
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| Polymorphism | P_ BNL2609 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | AD-genome wide Reference Map (2009) | AD_ch05_At.05 | N/A | 155 | BNL2609 | View |
| 2 | Emian-22 x 3-79, BC1 (2011) | AD_ch22_Dt.04 | N/A | 87.5 | BNL2609 | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch22_Dt.04 | N/A | 124 | BNL2609 | View |
| 4 | Yumian-1 x 7235, RIL (2015) | AD_ch05_At.05 | N/A | 96.6 | BNL2609 | View |
| 5 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch09_At.09 | N/A | 71.9 | BNL2609 | View |
| 6 | Monsanto SSR Bin Map, (2009) | AD_ch22_Dt.04 | N/A | 41 | BNL2609 | View |
| 7 | LMY22 x LY343, RIL (2016) | chr.22 | N/A | 33.4 | BNL2609 | View |
| 8 | LMY22 x LY343, RIL (2020) | A05 | N/A | 153.95 | BNL2609 | View |
| 9 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch05_At.05 | N/A | 81.3 | BNL2609b | View |
| 10 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch05_At.05 | N/A | 177.2 | BNL2609a | View |
| 11 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch05_At.05 | N/A | 26 | BNL2609-133 | View |
| 12 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch22_Dt.04 | N/A | 26.2 | BNL2609-1 | View |
Sequence
>BNL2609 ID=BNL2609; Name=BNL2609; organism=Gossypium hirsutum; type=genetic_marker; length=151bp
GTTCCCATGCATGCTTTCTTCCAAAATAACGTAACTGAGAAGGTAAAAGA
TGTGAAAACAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGC
AGAGACAGATGCTTATTAGTGATGGTTAAGTCACGTTGCTTGCACTGCTA
T
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