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Marker Overview
Name | BNL2589 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL2589_orig
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Source Type | genomic |
Repeat Motif | (AG)13 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL2589_F: CAAGCTTTGGAGTCCCTGAG |
Primer 2 | BNL2589_R: ATACATTCAAGTCCAATCAAAACG |
Polymorphism | P_ BNL2589 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch11_At.11 | N/A | 38.3 | BNL2589 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch11_At.11 | N/A | 192.9 | BNL2589 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch11_At.11 | N/A | 182.85 | BNL2589 | View |
4 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 278 | BNL2589 | View |
5 | Emian-22 x 3-79, BC1 (2011) | AD_ch11_At.11 | N/A | 172.31 | BNL2589 | View |
6 | Palmeri x K-101, F2 (2007) | AD_ch11_At.11 | N/A | 156 | BNL2589 | View |
7 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch11_At.11 | N/A | 72.1 | BNL2589 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch11_At.11 | N/A | 76.8 | BNL2589 | View |
9 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch11_At.11 | N/A | 9.9 | BNL2589* | View |
10 | TM-1 x Hai-7124, BC1 (2007) | AD_ch11_At.11 | N/A | 124.3 | BNL2589-330 | View |
11 | TM-1 x Hai-7124, BC1 (2008) | AD_ch11_At.11 | N/A | 128.8 | BNL2589-330 | View |
12 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch11_At.11 | N/A | 80.2 | BNL2589-330 | View |
13 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 30.1 | BNL2589-330 | View |
14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch11_At.11 | N/A | 80.9 | BNL2589-245 | View |
15 | GB713 x Nem-X, F2 (2011) | AD_ch21_Dt.11 | N/A | 81.3 | BNL2589_229 | View |
16 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch21_Dt.11 | N/A | 141.3 | BNL2589 | View |
Sequence
>BNL2589 ID=BNL2589; Name=BNL2589; organism=Gossypium hirsutum; type=genetic_marker; length=224bp CAAGCTTTGGAGTCCCTGAGTCGTAAAGGTTGGTCCAATAATGGTCATTG AAGTTGTTTTAGCTAACTCTCTTTGATCCCTTCCCTCATAAAAGGGCAAA AAAAAAATGGTTTTTACTTTTGTTCTTTTCTCTCCTCTCTCTCTCTCTCT CTCTCTCTCTTGCTTCGTTTCATCCTATTTCTCATATCTCTGAAATTGAT CGTTTTGATTGGACTTGAATGTAT
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