BNL2589, BNL2589 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL2589
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL2589_orig
Source Typegenomic
Repeat Motif(AG)13
PCR ConditionAnnealing temperature: 55
Primer 1BNL2589_F: CAAGCTTTGGAGTCCCTGAG
Primer 2BNL2589_R: ATACATTCAAGTCCAATCAAAACG
PolymorphismP_ BNL2589
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL2589_origBNL2589_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch11_At.11N/A38.3BNL2589View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch11_At.11N/A192.9BNL2589View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch11_At.11N/A182.85BNL2589View
4AD-genome wide Reference Map (2009)AD_ch11_At.11N/A278BNL2589View
5Emian-22 x 3-79, BC1 (2011)AD_ch11_At.11N/A172.31BNL2589View
6Palmeri x K-101, F2 (2007)AD_ch11_At.11N/A156BNL2589View
7TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch11_At.11N/A72.1BNL2589View
8CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch11_At.11N/A76.8BNL2589View
9Handan-208 x Pima-90, F2:3 (2007)AD_ch11_At.11N/A9.9BNL2589*View
10TM-1 x Hai-7124, BC1 (2007)AD_ch11_At.11N/A124.3BNL2589-330View
11TM-1 x Hai-7124, BC1 (2008)AD_ch11_At.11N/A128.8BNL2589-330View
12Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch11_At.11N/A80.2BNL2589-330View
13TM-1 x Hai-7124, BC1 (2012)AD_ch11_At.11N/A30.1BNL2589-330View
14Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch11_At.11N/A80.9BNL2589-245View
15GB713 x Nem-X, F2 (2011)AD_ch21_Dt.11N/A81.3BNL2589_229View
16PD 94042 x (AD)4-08, F2 (2016)AD_ch21_Dt.11N/A141.3BNL2589View
Sequence
>BNL2589 ID=BNL2589; Name=BNL2589; organism=Gossypium hirsutum; type=genetic_marker; length=224bp
CAAGCTTTGGAGTCCCTGAGTCGTAAAGGTTGGTCCAATAATGGTCATTG
AAGTTGTTTTAGCTAACTCTCTTTGATCCCTTCCCTCATAAAAGGGCAAA
AAAAAAATGGTTTTTACTTTTGTTCTTTTCTCTCCTCTCTCTCTCTCTCT
CTCTCTCTCTTGCTTCGTTTCATCCTATTTCTCATATCTCTGAAATTGAT
CGTTTTGATTGGACTTGAATGTAT