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Marker Overview
| Name | BNL2557 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL2557_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)12 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL2557_F: ACCGTCCCTCATTTCAACAA |
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| Primer 2 | BNL2557_R: CAAGGGAAAACGCTCTCTGT |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch26_Dt.12 | N/A | 31.1 | BNL2557 | View |
| 2 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A08 | N/A | 124.1 | BNL2557 | View |
| 3 | TM-1 x 3-79, RIL (2012) | AD_ch26_Dt.12 | N/A | 93.04 | BNL2557 | View |
| 4 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch26_Dt.12 | N/A | 40.6 | BNL2557 | View |
| 5 | Emian-22 x 3-79, BC1 (2011) | AD_ch26_Dt.12 | N/A | 111.19 | BNL2557 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch26_Dt.12 | N/A | 205 | BNL2557 | View |
| 7 | Yumian-1 x T586, RIL (2006) | AD_ch26_Dt.12 | N/A | 61.3 | BNL2557 | View |
| 8 | Yumian-1 x T586, RIL (2015) | AD_ch26_Dt.12 | N/A | 100 | BNL2557 | View |
| 9 | Yumian-1 x 7235, RIL (2015) | AD_ch26_Dt.12 | N/A | 34.5 | BNL2557 | View |
| 10 | TM-1 x 3-79, RIL (2014) | AD_ch26_Dt.12 | N/A | 106 | BNL2557 | View |
| 11 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch26_Dt.12 | N/A | 35.4 | BNL2557 | View |
| 12 | Monsanto SSR Bin Map, (2009) | AD_ch26_Dt.12 | N/A | 21 | BNL2557 | View |
| 13 | Yumian-1 x T586, RIL (2009) | AD_ch26_Dt.12 | N/A | 61.3 | BNL2557/480t | View |
| 14 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch26_Dt.12 | N/A | 36.1 | BNL2557a | View |
| 15 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch26_Dt.12 | N/A | 20.6 | BNL2557b | View |
| 16 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch26_Dt.12 | N/A | 139.36 | BNL2557 | View |
| 17 | TM-1 x 3-79, RIL (2012.v3) | AD_ch26_Dt.12 | N/A | 105.95 | BNL2557 | View |
Sequence
>BNL2557 ID=BNL2557; Name=BNL2557; organism=Gossypium hirsutum; type=genetic_marker; length=243bp
ACCGTCCCTCATTTCAACAAGCTGACATAAGTGCTTCAAATCCTCCTCCG
TAATAGCACTTGAACATCCTTCATTAACAACTGATCTGGATGTGCTACAA
ACATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGATCN
AGTTCCAGCATTAAAATTAAGAACTTTNAATAGATTTCAAAGTTACCTGG
AATTGTCATATTCAGAAGGAGAAACAGAGAGCGTTTTCCCTTG
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