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Marker Overview
Name | BNL2471 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL2471_orig
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Source Type | genomic |
Repeat Motif | (AG)12 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL2471_F: GGGTTCATCGTGGAAGAGAA |
Primer 2 | BNL2471_R: GCCGGGATTTACACAAAATT |
Polymorphism | P_ BNL2471 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 3-79 x NM24016, RIL (2008) | AD_ch06_At.06 | N/A | 5.6 | BNL2471 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch17_Dt.03 | N/A | 75.1 | BNL2471 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch17_Dt.03 | N/A | 30.49 | BNL2471 | View |
4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch17_Dt.03 | N/A | 32.88 | BNL2471 | View |
5 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch17_Dt.03 | N/A | 103.1 | BNL2471 | View |
6 | Palmeri x K-101, F2 (2007) | AD_ch18_Dt.13 | N/A | 80.9 | BNL2471 | View |
7 | AD-genome wide Reference Map (2009) | AD_ch17_Dt.03 | N/A | 113 | BNL2471 | View |
8 | AD-genome wide Reference Map (2009) | AD_ch18_Dt.13 | N/A | 80 | BNL2471 | View |
9 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_chU | N/A | 12 | BNL2471 | View |
10 | Emian-22 x 3-79, BC1 (2011) | AD_ch17_Dt.03 | N/A | 82.04 | BNL2471 | View |
11 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch17_Dt.03 | N/A | 44.3 | BNL2471a | View |
12 | TM-1 x Hai-7124, BC1 (2007) | AD_ch17_Dt.03 | N/A | 65.4 | BNL2471-200 | View |
13 | TM-1 x Hai-7124, BC1 (2008) | AD_ch17_Dt.03 | N/A | 23 | BNL2471-200 | View |
14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch17_Dt.03 | N/A | 33.9 | BNL2471-200 | View |
15 | TM-1 x Hai-7124, BC1 (2012) | AD_ch17_Dt.03 | N/A | 73.1 | BNL2471-200 | View |
Sequence
>BNL2471 ID=BNL2471; Name=BNL2471; organism=Gossypium hirsutum; type=genetic_marker; length=199bp GGGTTCATCGTGGAAGAGAAGAAGAACAAAGAAGAAGAGAGAGAGAGAGA GAGAGAGAGGTAGAGAAAAAAAAAATGTTGAAAAAGGAGAAGAAAAAAAA AGATCTAATTTTTATTACAATATAAAATTCTATTTTTATGAAAAAAATAC TATTTACATATTATAATATTTTGACTTAAAATTTTGTGTAAATCCCGGC
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