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Marker Overview
| Name | BNL1681 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL1681_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)11 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL1681_F: GTGTGTGGGTGTGCATGTTT |
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| Primer 2 | BNL1681_R: TGGGGAGACTTTATCACGCT |
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| Polymorphism | P_ BNL1681 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch11_At.11 | N/A | 143.2 | BNL1681a | View |
| 2 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch11_At.11 | N/A | 85.3 | BNL1681a | View |
| 3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch21_Dt.11 | N/A | 162.3 | BNL1681b | View |
| 4 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch21_Dt.11 | N/A | 100.7 | BNL1681b | View |
| 5 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch11_At.11 | N/A | 131.68 | BNL1681 | View |
| 6 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch21_Dt.11 | N/A | 104.69 | BNL1681 | View |
| 7 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch21_Dt.11 | N/A | 101.68 | BNL1681 | View |
| 8 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch11_At.11 | N/A | 59.1 | BNL1681 | View |
| 9 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 249 | BNL1681 | View |
| 10 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch11_At.11 | N/A | 40.2 | BNL1681 | View |
| 11 | Yumian-1 x T586, F2:3 (2005) | AD_ch05_At.05 | N/A | 0 | BNL1681 | View |
| 12 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 84 | BNL1681 | View |
| 13 | AD-genome wide Reference Map (2009) | AD_ch21_Dt.11 | N/A | 165 | BNL1681 | View |
| 14 | Yumian-1 x T586, F2:7 (2008) | AD_ch21_Dt.11 | N/A | 92.8 | BNL1681 | View |
| 15 | Yumian-1 x T586, RIL (2006) | AD_ch21_Dt.11 | N/A | 71 | BNL1681 | View |
| 16 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch05_At.05 | N/A | 0 | BNL1681 | View |
| 17 | NemX x SJ-2, RIL (2005) | AD_ch11_At.11 | N/A | 286.5 | BNL1681 | View |
| 18 | Yumian-1 x T586, RIL (2015) | AD_ch21_Dt.11 | N/A | 98 | BNL1681 | View |
| 19 | Monsanto SSR Bin Map, (2009) | AD_ch11_At.11 | N/A | 61 | BNL1681 | View |
| 20 | TM-1 x Hai-7124, BC1 (2007) | AD_ch11_At.11 | N/A | 107.8 | BNL1681-110 | View |
| 21 | TM-1 x Hai-7124, BC1 (2008) | AD_ch11_At.11 | N/A | 104.19 | BNL1681-110 | View |
| 22 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch19_Dt.05 | N/A | 51 | BNL1681-110 | View |
| 23 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 59 | BNL1681-110 | View |
| 24 | Yumian-1 x T586, RIL (2009) | AD_ch21_Dt.11 | N/A | 91.7 | BNL1681/110t(C21) | View |
| 25 | GB713 x Nem-X, F2 (2011) | AD_ch21_Dt.11 | N/A | 115.1 | BNL1681_112 | View |
| 26 | TM-1 x Hai-7124, BC1S1 (2007) | AD_ch11_At.11 | N/A | 73.1 | BNL1681_110 | View |
| 27 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch21_Dt.11 | N/A | 119.7 | BNL1681 | View |
| 28 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch21_Dt.11 | N/A | 85.62 | BNL1681 | View |
| 29 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch11_At.11 | N/A | 165.5 | BNL1681 | View |
Sequence
>BNL1681 ID=BNL1681; Name=BNL1681; organism=Gossypium hirsutum; type=genetic_marker; length=111bp
GTGTGTGGGTGTGCATGTTTACGTATAGAGAGAGAGAGAGAGAGAGAGAG
CACCGAGAGAGAGACCTTTTATTCGTCTGAGTTCCTTACATAGCGTGATA
AAGTCTCCCCA
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