|
|
Marker Overview
| Name | BNL1551 |
|---|
| Genbank ID | N/A |
|---|
| Type | SSR |
|---|
| Species | Gossypium hirsutum |
|---|
| Germplasm | Deltapine 90 |
|---|
| Source Sequence | BNL1551_orig
|
|---|
| Source Type | genomic |
|---|
| Repeat Motif | (AG)22 |
|---|
| PCR Condition | Annealing temperature: 55 |
|---|
| Primer 1 | BNL1551_F: CGCAAGCCACCTGTAAAAC |
|---|
| Primer 2 | BNL1551_R: TCGAATTTTCTCTCTCTCTCTCTCT |
|---|
| Polymorphism | P_ BNL1551 |
|---|
| Comment | Primer data obtained in 2000 |
|---|
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch21_Dt.11 | N/A | 77.1 | BNL1551 | View |
| 2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch21_Dt.11 | N/A | 64.94 | BNL1551 | View |
| 3 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch21_Dt.11 | N/A | 48.73 | BNL1551 | View |
| 4 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch16_Dt.07 | N/A | 36.1 | BNL1551 | View |
| 5 | Palmeri x K-101, F2 (2007) | AD_ch16_Dt.07 | N/A | 52.8 | BNL1551 | View |
| 6 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_chU | N/A | 164.6 | BNL1551 | View |
| 7 | Yumian-1 x T586, F2:3 (2005) | AD_ch05_At.05 | N/A | 51.5 | BNL1551 | View |
| 8 | AD-genome wide Reference Map (2009) | AD_ch16_Dt.07 | N/A | 149 | BNL1551 | View |
| 9 | AD-genome wide Reference Map (2009) | AD_ch21_Dt.11 | N/A | 70 | BNL1551 | View |
| 10 | TM-1 x 3-79, RIL (2012) | AD_ch21_Dt.11 | N/A | 110.54 | BNL1551 | View |
| 11 | Yumian-1 x T586, F2:7 (2008) | AD_ch21_Dt.11 | N/A | 36.1 | BNL1551 | View |
| 12 | Yumian-1 x T586, RIL (2006) | AD_ch21_Dt.11 | N/A | 31.2 | BNL1551 | View |
| 13 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch21_Dt.11 | N/A | 18.8 | BNL1551 | View |
| 14 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch05_At.05 | N/A | 51.5 | BNL1551 | View |
| 15 | DH962 x Jinmian-6, F2 (2009) | AD_ch21_Dt.11 | N/A | 59.5 | BNL1551 | View |
| 16 | DH962 x Jinmian-6, F2 (2009) | AD_ch21_Dt.11 | N/A | 59.5 | BNL1551 | View |
| 17 | Yumian-1 x T586, RIL (2015) | AD_ch21_Dt.11 | N/A | 139.7 | BNL1551 | View |
| 18 | Yumian-1 x 7235, RIL (2015) | AD_ch21_Dt.11 | N/A | 40.4 | BNL1551 | View |
| 19 | DH962 X Ji Mian 5, F2 (2015) | AD_ch21_Dt.11 | N/A | 103.44 | BNL1551 | View |
| 20 | TM-1 x 3-79, RIL (2014) | AD_ch21_Dt.11 | N/A | 116.8 | BNL1551 | View |
| 21 | DH962 x Ji Mian 5, RIL (2015) | AD_ch21_Dt.11 | N/A | 5.8 | BNL1551 | View |
| 22 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch21_Dt.11 | N/A | 5.7 | BNL1551 | View |
| 23 | SG 747 x Giza 75, BIL (2013) | AD_ch21_Dt.11 | N/A | 7.8 | BNL1551 | View |
| 24 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch21_Dt.11 | N/A | 89.8 | BNL1551 | View |
| 25 | Monsanto SSR Bin Map, (2009) | AD_ch21_Dt.11 | N/A | 101 | BNL1551 | View |
| 26 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch21_Dt.11 | N/A | 92.6 | BNL1551a | View |
| 27 | TM-1 x Hai-7124, BC1 (2007) | AD_ch21_Dt.11 | N/A | 71.7 | BNL1551-190 | View |
| 28 | TM-1 x Hai-7124, BC1 (2008) | AD_ch21_Dt.11 | N/A | 63.39 | BNL1551-190 | View |
| 29 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch21_Dt.11 | N/A | 59.1 | BNL1551-190 | View |
| 30 | TM-1 x Hai-7124, BC1 (2012) | AD_ch21_Dt.11 | N/A | 116.6 | BNL1551-190 | View |
| 31 | Yumian-1 x T586, RIL (2009) | AD_ch21_Dt.11 | N/A | 35.1 | BNL1551/180t(C21) | View |
| 32 | GB713 x Nem-X, F2 (2011) | AD_ch21_Dt.11 | N/A | 154.2 | BNL1551_162 | View |
| 33 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch21_Dt.11 | N/A | 106.14 | BNL1551 | View |
| 34 | TM-1 x 3-79, RIL (2012.v3) | AD_ch21_Dt.11 | N/A | 116.84 | BNL1551 | View |
| 35 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch21_Dt.11 | N/A | 52.8 | BNL1551 | View |
Sequence
>BNL1551 ID=BNL1551; Name=BNL1551; organism=Gossypium hirsutum; type=genetic_marker; length=184bp
CGCAAGCCACCTGTAAAACGTCGGTACTCCCATGGCTGTGCTGTGAAGAA
TTGGAGGTTCCTCCGGTAAGGTTTTGGAGGGTGAGGTTTTTTTTTTCCGA
TATAGGGAAAATATCGGAAAAAGAAAGAAAAAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAAAATTCGA
|
