BNL1414, BNL1414 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL1414
AliasMAS-L11
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL1414_orig
Source Typegenomic
Repeat Motif(AG)16
PCR ConditionAnnealing temperature: 55
Primer 1BNL1414_F: AAAAACCCCTTTCCATCCAT
Primer 2BNL1414_R: GGGTGTCCTTCCCAAAAATT
PolymorphismP_ BNL1414
Publication[view all]
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL1414_origBNL1414_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch23_Dt.09N/A103.8BNL1414View
27235 x TM-1, RIL (2007)AD_ch23_Dt.09N/A23.8BNL1414View
3CCRI-36 x Hai-7124, F2 (2007)AD_ch09_At.09N/A54.2BNL1414View
4Emian-22 x 3-79, BC1 (2011)AD_ch09_At.09N/A122.47BNL1414View
5Guazuncho-2 x VH8-4602, consensus (2009)AD_ch23_Dt.09N/A100.34BNL1414View
6Guazuncho-2 x VH8-4602, consensus (2009)AD_ch09_At.09N/A87.42BNL1414View
7Hai-7124 x Junmian-1, BC1 (2008) partAD_ch09_At.09N/A24.6BNL1414View
8AD-genome wide Reference Map (2009)AD_ch23_Dt.09N/A147BNL1414View
9AD-genome wide Reference Map (2009)AD_ch09_At.09N/A155BNL1414View
10Xinluzao-1 x Hai-7124, F2 (2008)AD_ch09_At.09N/A54.8BNL1414View
11Zhongmiansuo-12 x 8891, RIL (2007)AD_ch23_Dt.09N/A61.5BNL1414View
12Handan-208 x Pima-90, F2:3 (2007)AD_ch09_At.09N/A108.5BNL1414View
137235 x TM-1, F2:3 (2005)AD_ch23_Dt.09N/A25.7BNL1414View
14PD6992 x SM3, F2:3 (2005)AD_ch23_Dt.09N/A24.2BNL1414View
15TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch23_Dt.09N/A56.3BNL1414View
16CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch09_At.09N/A122.8BNL1414View
17LMY22 x LY343, RIL (2020)D09N/A22.46BNL1414View
18Deltapine x Giza-83, F2 (2008)AD_chUN/A91.1MAS-L11-150View
19Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch09_At.09N/A215.5BNL1414bView
20TM-1 x 3-79, RIL (2012)AD_ch23_Dt.09N/A54.88BNL1414bView
21Guazuncho-2 x VH8-4602, BC2 (2005)AD_ch23_Dt.09N/A121.7BNL1414bView
22TM-1 x 3-79, RIL (2014)AD_ch23_Dt.09N/A90.7BNL1414bView
23SG 747 x Giza 75, BIL (2013)AD_ch23_Dt.09N/A124BNL1414bView
24Monsanto SSR Bin Map, (2009)AD_ch23_Dt.09N/A41BNL1414bView
25Guazuncho-2 x VH8-4602, BC2 (2005)AD_ch09_At.09N/A109.8BNL1414aView
26TM-1 x 3-79, RIL (2012)AD_ch09_At.09N/A51.93BNL1414aView
27Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch23_Dt.09N/A174.4BNL1414aView
28TM-1 x 3-79, RIL (2014)AD_ch09_At.09N/A88.7BNL1414aView
29SG 747 x Giza 75, BIL (2013)AD_ch09_At.09N/A63.9BNL1414aView
30Monsanto SSR Bin Map, (2009)AD_ch09_At.09N/A41BNL1414aView
31TM-1 x Hai-7124, BC1 (2007)AD_ch09_At.09N/A96.5BNL1414-135View
32TM-1 x Hai-7124, BC1 (2008)AD_ch09_At.09N/A97.05BNL1414-135View
33Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch09_At.09N/A91BNL1414-135View
34TM-1 x Hai-7124, BC1 (2012)AD_ch09_At.09N/A95.8BNL1414-135View
35TM-1 x Hai-7124, BC1 (2007)AD_ch23_Dt.09N/A124BNL1414-175View
36TM-1 x Hai-7124, BC1 (2008)AD_ch23_Dt.09N/A123.55BNL1414-175View
37TM-1 x Hai-7124, BC1 (2012)AD_ch23_Dt.09N/A120.2BNL1414-175View
38TM-1 x 3-79, RIL (2012.v3)AD_ch09_At.09N/A88.71BNL1414aView
39TM-1 x 3-79, RIL (2012.v3)AD_ch23_Dt.09N/A90.7BNL1414bView
40PD 94042 x (AD)4-08, F2 (2016)AD_ch09_At.09N/A134.4BNL1414bView
41PD 94042 x (AD)4-08, F2 (2016)AD_ch23_Dt.09N/A165.7BNL1414aView
Sequence
>BNL1414 ID=BNL1414; Name=BNL1414; organism=Gossypium hirsutum; type=genetic_marker; length=139bp
AAAAACCCCTTTCCATCCATAGAACGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAATGCAATATGATTTACAGTGTGAAGTATATGTTTGGTTGCGGG
GAAACCGAAGCAAAATAAAAATTTTTGGGAAGGACACCC