BNL1379, BNL1379 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL1379
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL1379_orig
Source Typegenomic
Repeat Motif(AG)21
PCR ConditionAnnealing temperature: 55
Primer 1BNL1379_F: TGAGCCTCAAGCATCCTTTT
Primer 2BNL1379_R: TTAAGCTCTTTTTTTCTTTTTTTACG
PolymorphismP_ BNL1379
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL1379_origBNL1379_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch03_At.03N/A85.92BNL1379View
2Xinluzao-1 x Hai-7124, F2 (2008)AD_ch03_At.03N/A40.1BNL1379View
3AD-genome wide Reference Map (2009)AD_ch03_At.03N/A48BNL1379View
4TM-1 x 3-79, RIL (2012)AD_ch03_At.03N/A75.31BNL1379View
5TM-1 x 3-79, RIL (2014)AD_ch03_At.03N/A41.1BNL1379View
6Monsanto SSR Bin Map, (2009)AD_ch03_At.03N/A81BNL1379View
7HS-46 x MARCABUCAG8US-1-88, RIL (2009)AD_ch03_At.03N/A27BNL1379-340View
8TM-1 x 3-79, RIL (2012.v3)AD_ch03_At.03N/A41.06BNL1379View
9PD 94042 x (AD)4-08, F2 (2016)AD_ch03_At.03N/A135.4BNL1379View
Sequence
>BNL1379 ID=BNL1379; Name=BNL1379; organism=Gossypium hirsutum; type=genetic_marker; length=337bp
TGAGCCTCAAGCATCCTTTTCCTAGTAACGTTAATATCAAAGCCTTAAGC
CTAAATGATTCAAGTACTTAACCCTTCTATTTCTCTATTTTTTTAAATGT
ACTATGTAATAGATGTCAAAGCATAGAGATTGAGGGTAGTAGAAACGTTA
TGGCAGTTTTGTATGNGGTAAAAGAAAATGAAGAGGTTATGTGATTTAGT
ACAATAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGT
GAGTGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAACATTGT
GAATGAAAGAGCGTAAAAAAAGAAAAAAAGAGCTTAA