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Marker Overview
| Name | BNL1026 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL1026_orig
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| Source Type | genomic |
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| Repeat Motif | (TC)5+(AC)12+(AT)4 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL1026_F: TTGGGATGTTTCCAAACGTT |
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| Primer 2 | BNL1026_R: AAGCAATTTGACCGACAACC |
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| Polymorphism | P_ BNL1026 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A13 | N/A | 113.3 | BNL1026 | View |
| 2 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch16_Dt.07 | N/A | 125.6 | BNL1026 | View |
| 3 | Emian-22 x 3-79, BC1 (2011) | AD_ch07_At.07 | N/A | 82.53 | BNL1026 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch16_Dt.07 | N/A | 131 | BNL1026 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch07_At.07 | N/A | 84 | BNL1026 | View |
| 6 | Yumian-1 x T586, RIL (2006) | AD_ch16_Dt.07 | N/A | 50.7 | BNL1026 | View |
| 7 | DH962 x Jinmian-6, F2 (2009) | AD_ch07_At.07 | N/A | 21.9 | BNL1026 | View |
| 8 | DH962 x Jinmian-6, F2 (2009) | AD_ch07_At.07 | N/A | 21.9 | BNL1026 | View |
| 9 | Yumian-1 x T586, RIL (2015) | AD_ch16_Dt.07 | N/A | 71.3 | BNL1026 | View |
| 10 | DH962 X Ji Mian 5, F2 (2015) | AD_ch07_At.07 | N/A | 71.58 | BNL1026 | View |
| 11 | DH962 X Ji Mian 5, F2 (2015) | AD_ch16_Dt.07 | N/A | 71.58 | BNL1026 | View |
| 12 | GX1135 x GX100-2, RIL (2016) | AD_ch16_Dt.07 | N/A | 31.2 | BNL1026 | View |
| 13 | DH962 x Ji Mian 5, RIL (2015) | AD_ch17_Dt.03 | N/A | 49.7 | BNL1026 | View |
| 14 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch16_Dt.07 | N/A | 145.4 | BNL1026 | View |
| 15 | Monsanto SSR Bin Map, (2009) | AD_ch07_At.07 | N/A | 21 | BNL1026 | View |
| 16 | LMY22 x LY343, RIL (2016) | chr.16 | N/A | 25.4 | BNL1026 | View |
| 17 | LMY22 x LY343, RIL (2020) | D07 | N/A | 13.81 | BNL1026 | View |
| 18 | TM-1 x 3-79, RIL (2012) | AD_ch07_At.07 | N/A | 86.93 | BNL1026a | View |
| 19 | TM-1 x 3-79, RIL (2014) | AD_ch07_At.07 | N/A | 50.2 | BNL1026a | View |
| 20 | Monsanto SSR Bin Map, (2009) | AD_ch07_At.07 | N/A | 21 | BNL1026a | View |
| 21 | TM-1 x 3-79, RIL (2012) | AD_ch16_Dt.07 | N/A | 82.92 | BNL1026b | View |
| 22 | TM-1 x 3-79, RIL (2014) | AD_ch16_Dt.07 | N/A | 41.3 | BNL1026b | View |
| 23 | Monsanto SSR Bin Map, (2009) | AD_ch16_Dt.07 | N/A | 121 | BNL1026b | View |
| 24 | TM-1 x Hai-7124, BC1 (2008) | AD_ch07_At.07 | N/A | 65.79 | BNL1026-195 | View |
| 25 | TM-1 x Hai-7124, BC1 (2012) | AD_ch07_At.07 | N/A | 59.3 | BNL1026-195 | View |
| 26 | TM-1 x Hai-7124, BC1 (2008) | AD_ch16_Dt.07 | N/A | 79.6 | BNL1026-300 | View |
| 27 | H16 x T586, F2 (2009) | AD_ch16_Dt.07 | N/A | 79.2 | BNL1026-300 | View |
| 28 | TM-1 x Hai-7124, BC1 (2012) | AD_ch16_Dt.07 | N/A | 51.2 | BNL1026-300 | View |
| 29 | Yumian-1 x T586, RIL (2009) | AD_ch16_Dt.07 | N/A | 19.5 | BNL1026/200y | View |
| 30 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch16_Dt.07 | N/A | 104.02 | BNL1026 | View |
| 31 | TM-1 x 3-79, RIL (2012.v3) | AD_ch07_At.07 | N/A | 50.21 | BNL1026a | View |
| 32 | TM-1 x 3-79, RIL (2012.v3) | AD_ch16_Dt.07 | N/A | 41.25 | BNL1026b | View |
Sequence
>BNL1026 ID=BNL1026; Name=BNL1026; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTGGGATGTTTCCAAACGTTTGTTTGTTCTTTCTTTTTGNCGTTTCTTCA
GAGTTTTTTCTTCTCTCTCTCACACACACACACACACACACACACATATA
TATAGGGTTGTCGGTCAAATTGCTT
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