BNL0625, BNL0625 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL0625
AliasBNL625
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL0625_orig
Source Typegenomic
Repeat Motif(AG)14
PCR ConditionAnnealing temperature: 55
Primer 1BNL0625_F: AGAGAGGGGGGAAAAGTTCA
Primer 2BNL0625_R: GCCAGGCATGGTTTCTATGT
PolymorphismP_ BNL0625
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL0625_origBNL0625_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch11_At.11N/A119.3BNL625View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch11_At.11N/A100.1BNL625View
3Handan-208 x Pima-90, F2:3 (2007)AD_ch04_At.04N/A105.1BNL625View
4Yumian-1 x T586, F2:3 (2005)AD_chUN/A19.6BNL625View
5Emian-22 x 3-79, BC1 (2011)AD_ch11_At.11N/A98.33BNL625View
6CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch11_At.11N/A139.5BNL625View
7Deltapine-61 x Texas-701, F2 (2007)AD_ch11_At.11N/A0.6BNL625-234View
8Guazuncho-2 x VH8-4602, consensus (2009)AD_ch11_At.11N/A86.77BNL0625View
9AD-genome wide Reference Map (2009)AD_ch11_At.11N/A72BNL0625View
10AD-genome wide Reference Map (2009)AD_ch04_At.04N/A142BNL0625View
11TM-1 x 3-79, RIL (2006)AD_ch11_At.11N/A78.8BNL0625View
12Yumian-1 x T586, F2:7 (2008)AD_ch11_At.11N/A0BNL0625View
13AD-genome wide Reference Map (2009)AD_ch12_At.12N/A77BNL0625View
14TM-1 x 3-79, RIL (2012)AD_ch11_At.11N/A99.78BNL0625View
15Yumian-1 x T586, RIL (2006)AD_ch11_At.11N/A55.7BNL0625View
16Yumian-1 x T586, RIL (2015)AD_ch11_At.11N/A76.5BNL0625View
17TM-1 x 3-79, RIL (2014)AD_ch11_At.11N/A102.5BNL0625View
18Monsanto SSR Bin Map, (2009)AD_ch11_At.11N/A101BNL0625View
19Palmeri x K-101, F2 (2007)AD_ch11_At.11N/A69.4BNL625bView
20Palmeri x K-101, F2 (2007)AD_ch12_At.12N/A83.8BNL625aView
21TM-1 x Hai-7124, BC1 (2007)AD_ch11_At.11N/A75.1BNL625-205View
22TM-1 x Hai-7124, BC1 (2008)AD_ch11_At.11N/A73.56BNL625-205View
23TM-1 x Hai-7124, BC1 (2012)AD_ch11_At.11N/A87.4BNL625-205View
24TM-1 x Hai-7124, BC1 (2007)AD_ch11_At.11N/A80.3BNL625-185View
25TM-1 x Hai-7124, BC1 (2008)AD_ch11_At.11N/A80.68BNL625-185View
26TM-1 x Hai-7124, BC1 (2012)AD_ch11_At.11N/A82BNL625-185View
27Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch19_Dt.05N/A47.5BNL625-235View
28Yumian-1 x T586, RIL (2009)AD_ch11_At.11N/A55.1BNL0625/120t(C11)View
29Yumian-1 x T586, F2:3 (2005.v0)AD_chUN/A19.6BNL625(C12)View
30TM-1 x 3-79, RIL (2012.v3)AD_ch11_At.11N/A102.45BNL0625View
31PD 94042 x (AD)4-08, F2 (2016)AD_ch11_At.11N/A119.4BNL625View
Sequence
>BNL0625 ID=BNL0625; Name=BNL0625; organism=Gossypium hirsutum; type=genetic_marker; length=244bp
AGAGAGGGGGGAAAAGTTCAAATGNTTTAAAAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAAGACATATNNCCAATAACTAAACTGAAAGCTTGAAAGAAT
CGCCTTTTGAGTTTATAGCAAAAGCAGTCATCCCAAAAATCCTAGGAAGA
TTAGATACACCAACTTCTAACAAGCGATGATAGAATTCCTATAACAAAAA
AAATTCCTCAAACAATATGACAAAACATAGAAACCATGCCTGGC