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Marker Overview
Name | BNL0448 |
Alias | BNL448
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Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL0448_orig
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Source Type | genomic |
Repeat Motif | (CT)13 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL0448_F: GCAGCTTGCTTTTCTGCTTC |
Primer 2 | BNL0448_R: ACGCAAGCTTGGTCAATACC |
Polymorphism | P_ BNL0448 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch22_Dt.04 | N/A | 17.9 | BNL448 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch22_Dt.04 | N/A | 110.4 | BNL448 | View |
3 | Hai-7124 x Junmian-1, BC1 (2008) part | AD_ch22_Dt.04 | N/A | 43.4 | BNL448 | View |
4 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch22_Dt.04 | N/A | 0 | BNL448 | View |
5 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_chU | N/A | 20.3 | BNL448 | View |
6 | Yumian-1 x T586, F2:3 (2005) | AD_ch22_Dt.04 | N/A | 8.6 | BNL448 | View |
7 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch22_Dt.04 | N/A | 0 | BNL448 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch22_Dt.04 | N/A | 109.7 | BNL448 | View |
9 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch20_Dt.10 | N/A | 0.4 | BNL448a | View |
10 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch20_Dt.10 | N/A | 14 | BNL448b | View |
11 | TM-1 x 3-79, RIL (2006) | AD_ch22_Dt.04 | N/A | 50.2 | BNL0448 | View |
12 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 208.2 | BNL0448 | View |
13 | AD-genome wide Reference Map (2009) | AD_ch22_Dt.04 | N/A | 70 | BNL0448 | View |
14 | Yumian-1 x T586, RIL (2006) | AD_ch22_Dt.04 | N/A | 59.4 | BNL0448 | View |
15 | Yumian-1 x T586, RIL (2015) | AD_ch22_Dt.04 | N/A | 18.9 | BNL0448 | View |
16 | TM-1 x 3-79, RIL (2014) | AD_ch22_Dt.04 | N/A | 17.6 | BNL0448 | View |
17 | Monsanto SSR Bin Map, (2009) | AD_ch19_Dt.05 | N/A | 0 | BNL0448 | View |
18 | Monsanto SSR Bin Map, (2009) | AD_ch22_Dt.04 | N/A | 61 | BNL0448c | View |
19 | TM-1 x Hai-7124, BC1 (2007) | AD_ch22_Dt.04 | N/A | 22.7 | BNL448-220 | View |
20 | TM-1 x Hai-7124, BC1 (2008) | AD_ch22_Dt.04 | N/A | 22.09 | BNL448-220 | View |
21 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch22_Dt.04 | N/A | 81.3 | BNL448-220 | View |
22 | TM-1 x Hai-7124, BC1 (2012) | AD_ch22_Dt.04 | N/A | 99.5 | BNL448-220 | View |
23 | Yumian-1 x T586, RIL (2009) | AD_ch22_Dt.04 | N/A | 42.3 | BNL0448/205t(C20,C22) | View |
24 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch22_Dt.04 | N/A | 8.6 | BNL448(C22,C20) | View |
25 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch22_Dt.04 | N/A | 111.2 | BNL448 | View |
26 | TM-1 x 3-79, RIL (2012.v3) | AD_ch22_Dt.04 | N/A | 17.59 | BNL0448 | View |
27 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch22_Dt.04 | N/A | 33.2 | BNL448 | View |
Sequence
>BNL0448 ID=BNL0448; Name=BNL0448; organism=Gossypium hirsutum; type=genetic_marker; length=216bp GCAGCTTGCTTTTCTGCTTCTATTACAGCCTCCAGCTAAGAAAGACGAAA AATGTAAACAAAAATGAAGCTATAAATAAAATTACAGAAAATGACCAAAA AAGAGAATTAGAACTGAATTAACTTATAAACACAAATAGTTTTTTTAAGG AGAGAGAGAGAGAGAGAGAGAGAGAGAAGCAAAGAAACCTGTTGCTGGTA TTGACCAAGCTTGCGT
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