BNL2449, BNL2449 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL2449
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL2449_orig
Source Typegenomic
Repeat Motif(GA)16, (TC)16
PCR ConditionAnnealing temperature: 55
Primer 1BNL2449_F: ATCTTTCAAACAACGGCAGC
Primer 2BNL2449_R: CGATTCCGGACTCTTGATGT
PolymorphismP_ BNL2449
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL2449_origBNL2449_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch13_At.13N/A82.8BNL2449View
2Emian-22 x 3-79, BC1 (2011)AD_ch13_At.13N/A119.53BNL2449View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch10_At.10N/A42.14BNL2449View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch13_At.13N/A90.17BNL2449View
5TM-1 x 3-79, RIL (2012)AD_ch13_At.13N/A68.57BNL2449View
6Xinluzao-1 x Hai-7124, F2 (2008)AD_ch13_At.13N/A27.1BNL2449View
7Yumian-1 x T586, F2:3 (2005)AD_ch13_At.13N/A30.4BNL2449View
8Yumian-1 x T586, F2:7 (2008)AD_ch13_At.13N/A20BNL2449View
9Acala-44 x Pima S-7, F2 (2004)AD_chUN/A4.8BNL2449View
10AD-genome wide Reference Map (2009)AD_ch10_At.10N/A56BNL2449View
11AD-genome wide Reference Map (2009)AD_ch13_At.13N/A188BNL2449View
12Yumian-1 x T586, RIL (2006)AD_ch13_At.13N/A38.2BNL2449View
13Yumian-1 x T586, F2:3 (2005.v0)AD_ch01_At.01N/A30.4BNL2449View
14Yumian-1 x T586, F2:3 (2005.v0)AD_ch13_At.13N/A30.4BNL2449View
15PD6992 x SM3, F2:3 (2005)AD_ch13_At.13N/A0BNL2449View
16Yumian-1 x T586, RIL (2015)AD_ch13_At.13N/A53.1BNL2449View
17Yumian-1 x 7235, RIL (2015)AD_ch13_At.13N/A45.8BNL2449View
18TM-1 x 3-79, RIL (2014)AD_ch13_At.13N/A65.3BNL2449View
19TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch13_At.13N/A56.3BNL2449View
20W10 x TM-1, F2:3 (2015)AD_ch13_At.13N/A18.1BNL2449View
21GX1135 x GX100-2, F2 (2013)AD_ch13_At.13N/A102.6BNL2449View
22GX1135 x GX100-2, RIL (2016)AD_ch13_At.13N/A57.8BNL2449View
23Emian-22 x 3-79, BC1 (2015)AD_ch13_At.13N/A80.9BNL2449View
24LMY28 x XLZ24, RIL (2018)AD_ch13_At.13N/A104.85BNL2449View
25Monsanto SSR Bin Map, (2009)AD_ch13_At.13N/A81BNL2449View
26Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch13_At.13N/A147BNL2449aView
27H18 x TM-1, F2 (2005)AD_ch13_At.13N/A75.6BNL2449aView
280-153 x sGK9708, RIL (2016)AD_ch13_At.13N/A33.8BNL2449aView
29Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch10_At.10N/A60.4BNL2449bView
30H18 x TM-1, F2 (2005)AD_ch13_At.13N/A77.9BNL2449bView
310-153 x sGK9708, RIL (2016)AD_ch13_At.13N/A31.4BNL2449bView
32TM-1 x Hai-7124, BC1 (2008)AD_ch13_At.13N/A61.05BNL2449-140View
33Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch13_At.13N/A33.2BNL2449-140View
34TM-1 x Hai-7124, BC1 (2007)AD_ch13_At.13N/A60.8BNL2449-140View
35TM-1 x Hai-7124, BC1 (2012)AD_ch13_At.13N/A76.4BNL2449-140View
36Yumian-1 x T586, RIL (2009)AD_ch13_At.13N/A25BNL2449/170t(C13)View
37TM-1 x 3-79, RIL (2012.v3)AD_ch13_At.13N/A65.26BNL2449View
Sequence
>BNL2449 ID=BNL2449; Name=BNL2449; organism=Gossypium hirsutum; type=genetic_marker; length=145bp
ATCTTTCAAACAACGGCAGCGCATGGAGATATTAGATGAACCATAAGTGC
GACAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACGAATAACTA
TGTACCCTCACACTTGATTAATCAAACATCAAGAGTCCGGAATCG