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Marker Overview
Name | CGR5282 |
Genbank ID | GQ393393 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 33 B |
Source Sequence | MONCS0358
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Source Type | genomic |
PCR Condition | Annealing temperature: 55 |
Primer 1 | CGR5282_F: AGGCTCCTTATGACGTGGG |
Primer 2 | CGR5282_R: ACCTCCTTCCCTCACACCTT |
Publication | [view all] |
Contact | Monsanto
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Comment | Primer data obtained in 2009-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch01_At.01 | N/A | 41.5 | CGR5282 | View |
2 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch15_Dt.01 | N/A | 37.2 | CGR5282 | View |
3 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch01_At.01 | N/A | 63.7 | CGR5282 | View |
4 | Monsanto SSR Bin Map, (2009) | AD_ch15_Dt.01 | N/A | 0 | CGR5282 | View |
5 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch01_At.01 | N/A | 109.9 | MON_CGR5282 | View |
6 | DH962 X Ji Mian 5, F2 (2015) | AD_ch01_At.01 | N/A | 135.57 | MON_CGR5282 | View |
7 | DH962 X Ji Mian 5, F2 (2015) | AD_ch15_Dt.01 | N/A | 135.57 | MON_CGR5282 | View |
8 | DH962 x Ji Mian 5, RIL (2015) | AD_ch01_At.01 | N/A | 7.1 | MON_CGR5282 | View |
9 | DH962 x Ji Mian 5, RIL (2015) | AD_ch15_Dt.01 | N/A | 7.1 | MON_CGR5282 | View |
10 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch01_At.01 | N/A | 79.58 | CGR5282 | View |
11 | MGG-293-793, MAGIC (2018) | AD_ch01_At.01 | N/A | 3.9 | CGR5282c | View |
12 | MGG-293-793, MAGIC (2018) | AD_ch01_At.01 | N/A | 8.9 | CGR5282b | View |
13 | MGG-293-793, MAGIC (2018) | AD_ch15_Dt.01 | N/A | 163.9 | CGR5282a | View |
Sequence
>CGR5282 ID=CGR5282; Name=CGR5282; organism=Gossypium hirsutum; type=genetic_marker; length=156bp AGGCTCCTTATGACGTGGGGATTTTGGGTGGGATGGGTTTTTGGAGTAAA CTATTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTA CATTTATCGCTGCTAAAATGTAAACCTTTATTGTGTAAGGTGTGAGGGAA GGAGGT
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