PGML4823, PGML4823 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML4823
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAAT)3
Primer 1PGML4823_F: CCACGTAATTTCTTGAATTGGA
Primer 2PGML4823_R: ATCATGCATGGGACAGACCT
Product Length102
Publication[view all]
CommentBAC_ID=FITC118603.b1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D01chromosomeD01:62599683..62599784 -
CM018215.1chromosomeCM018215.1:61050011..61050112 -
CM018215.1chromosomeCM018215.1:61045905..61046006 -
D5_01chromosomeD5_01:54951208..54951309 -
D5_01chromosomeD5_01:54947105..54947206 -
Chr02_CRI-A2_v1.0.a1chromosomeChr02_CRI-A2_v1.0.a1:97663933..97664034 -
D10_01chromosomeD10_01:1596539..1596640 +
D10_01chromosomeD10_01:1577207..1577308 -
CM016614.1chromosomeCM016614.1:135323506..135323607 -
CM016614.1chromosomeCM016614.1:135336102..135336203 -
CM016614.1chromosomeCM016614.1:135327704..135327805 -
CM016614.1chromosomeCM016614.1:135331897..135331996 -
Dt_chr9chromosomeDt_chr9:50937834..50937935 +
D01chromosomeD01:59724326..59724427 -
Ghir_D01chromosomeGhir_D01:61445302..61445403 -
D01chromosomeD01:62923746..62923847 -
D01chromosomeD01:62876428..62876529 -
D01chromosomeD01:59649846..59649947 -
Gbar_D01chromosomeGbar_D01:61298828..61298929 -
Gbar_D01chromosomeGbar_D01:61294722..61294823 -
D01chromosomeD01:61940014..61940115 -
D01chromosomeD01:61935776..61935877 -
CM017623.1chromosomeCM017623.1:62254547..62254648 -
CM017623.1chromosomeCM017623.1:62251068..62251169 -
CM017649.1chromosomeCM017649.1:63741685..63741786 -
CM017649.1chromosomeCM017649.1:63737581..63737682 -
CM017701.1chromosomeCM017701.1:61711044..61711145 -
CM017701.1chromosomeCM017701.1:61706939..61707040 -
D01chromosomeD01:63345486..63345587 -
Chr03chromosomeChr03:102333257..102333358 +
Chr01chromosomeChr01:121077742..121077843 -
Chr02chromosomeChr02:1754822..1754923 +
Chr01chromosomeChr01:50757781..50757882 -
Chr01chromosomeChr01:50753684..50753785 -
Chr02chromosomeChr02:59681902..59682002 -
chr02chromosomechr02:45900417..45900518 -
Chr_02chromosomeChr_02:40600265..40600366 -
Chr02chromosomeChr02:60585345..60585446 -
Chr02chromosomeChr02:60568172..60568273 -
Chr02chromosomeChr02:44324558..44324659 -
E01chromosomeE01:114832556..114832656 -
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x 7235, RIL (2015)AD_ch01_At.01N/A15.5PGML4823View
2CCRI-35 x Yumian-1, RIL (2015)AD_ch01_At.01N/A38.6PGML4823View
3CCRI-35 x Yumian-1, RIL (2017)AD_ch01_At.01N/A81.05PGML4823View
Sequence
>PGML4823 ID=PGML4823; Name=PGML4823; organism=Gossypium raimondii; type=genetic_marker; length=102bp
CCACGTAATTTCTTGAATTGGAACAGAATTATAGGGACTAAATAAATAAA
TAATGTAGCTAGTGCTTATTTAGCCATTGTCAAGGTCTGTCCCATGCATG
AT