g.raimondii_cottongen_reftransV1_0001112, g.raimondii_cottongen_reftransV1_0001112 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0001112
Unique Nameg.raimondii_cottongen_reftransV1_0001112
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length720
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr01chromosomeg.raimondii_cottongen_reftransV1_0001112:1..720 .
Chr01:8966194..8967208 -
Homology
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A061EHE6_THECC (MATE efflux family protein OS=Theobroma cacao GN=TCM_019339 PE=3 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 1.713e-128
Identity = 203/238 (85.29%), Postives = 213/238 (89.50%), Query Frame = 2 
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            AIAT+FCNVTGFSLLWGLCGALETLNGQAYGA QY KLGSYTYCAII +LPICLPVCLLWMYMDKLLVLIGQDPQ A +A RY+M LIP LF YAI+QSQVRFFQSQSLVLPM+F SLATLCFHI VCWVLVFK G G+ G A+AISFS WFNVILLG YMRYS SCEKTR L+L DV LSVKEFF FAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSS SLHY + F
Sbjct:   66 AIATSFCNVTGFSLLWGLCGALETLNGQAYGAMQYQKLGSYTYCAIISTLPICLPVCLLWMYMDKLLVLIGQDPQAAVVACRYSMWLIPALFAYAILQSQVRFFQSQSLVLPMLFISLATLCFHIPVCWVLVFKSGLGNTGAAMAISFSYWFNVILLGLYMRYSSSCEKTRILYLNDVILSVKEFFQFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSTSLHYNVPF 303
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2TXY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058000 PE=4 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 8.381e-107
Identity = 171/239 (71.55%), Postives = 200/239 (83.68%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            VAIAT+FCNVTGFSLL G  GA+ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G  + G AL+I  S W NVILLGF+MRYS SCEKTR   LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F
Sbjct:   60 VAIATSFCNVTGFSLLSGFAGAMETLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 298
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2T139_GOSRA (MATE efflux family protein OS=Gossypium raimondii GN=B456_008G058000 PE=3 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 3.069e-106
Identity = 171/239 (71.55%), Postives = 200/239 (83.68%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            VAIAT+FCNVTGFSLL G  GA+ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G  + G AL+I  S W NVILLGF+MRYS SCEKTR   LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F
Sbjct:   60 VAIATSFCNVTGFSLLSGFAGAMETLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 298
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2SVK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058000 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.045e-93
Identity = 153/217 (70.51%), Postives = 181/217 (83.41%), Query Frame = 2 
Query:   68 LETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            +ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G  + G AL+I  S W NVILLGF+MRYS SCEKTR   LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F
Sbjct:    1 METLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 217
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U7DYD6_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0229s00260g PE=4 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.390e-92
Identity = 145/235 (61.70%), Postives = 190/235 (80.85%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHY 706
            V+I  +F  VTGFSLL+GL G LETL GQAYGA QY K G+YTYCAII  LPIC+PV +LW++MD++L+ IGQDP+++ +A RYA CLIP LF YA++QS +R++QSQ L+LPM+FS+ ATLCFHI +CW L+FK+  GS G AL+I  S W NV+ L  YM +S SC+KTR ++   +F S+KEFF FA+PSAVM CLEWW+FE+L+L++GLLP+S+LETSVLSICL++ SLH+
Sbjct:   62 VSIGGSFAGVTGFSLLFGLAGGLETLCGQAYGAGQYQKFGTYTYCAIISLLPICVPVSILWIFMDRILIAIGQDPEISTVACRYATCLIPALFAYAVLQSLLRYYQSQGLILPMLFSTCATLCFHIPLCWALIFKWELGSTGAALSIDVSYWLNVVFLALYMGFSSSCKKTRVIYWNHIFSSIKEFFRFALPSAVMVCLEWWTFELLILLAGLLPDSQLETSVLSICLATTSLHF 296
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D3D4R0_BRAOL (MATE efflux family protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.674e-91
Identity = 144/238 (60.50%), Postives = 180/238 (75.63%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715
            VA+AT+F NV+GFS+++GL GALETL GQAYGA QY KLG+YTY AI  ++PIC  +  LW+YMDKLLV +GQDP ++ +A  YA  LIP LFG AIV    RF  +Q LVLP+++ ++ TL FHI VCW+LVFKFG GS G AL+IS S WF  ++L  Y+R+S SCE TRT    D    VK+FFH+ +PSA M CLEWW FE+L+L SGLLPN KLETSVLSICL++++LHY IS
Sbjct:   67 VALATSFTNVSGFSIMYGLAGALETLCGQAYGAKQYEKLGTYTYSAIASNIPICFLISTLWIYMDKLLVSLGQDPDISRVAGSYAFSLIPALFGQAIVIPLTRFLLTQGLVLPLLYCAVTTLLFHISVCWILVFKFGLGSNGAALSISVSFWFYAVILACYVRFSTSCEMTRTFVSDDFVSCVKQFFHYGVPSAAMLCLEWWLFELLILSSGLLPNPKLETSVLSICLTTETLHYVIS 304
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: R0G4M3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013560mg PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.029e-90
Identity = 146/237 (61.60%), Postives = 179/237 (75.53%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+ATAF NV+GFS+++GL GALETL GQAYGA QY KLG+YTY AI+ ++P CL + +LW YMDKLLV IGQDP ++ +A  YA+CLIP LF  A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC VLV+KFG GS G ALAIS S WFNV++L  Y+R+S SC +TR     D   S K+FF + IPSA MAC+EW  FE LVL SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   72 VALATAFTNVSGFSIMYGLVGALETLCGQAYGAKQYTKLGTYTYSAIVSNVPFCLLISILWFYMDKLLVSIGQDPDISRVAGSYAVCLIPALFSQAVQQPLTRFLQTQGLVLPLLYCAVTTLLFHIPVCLVLVYKFGLGSNGAALAISLSYWFNVLILALYVRFSSSCVETRGFVSDDFVSSAKQFFQYGIPSAAMACIEWSLFEFLVLSSGLLPNPKLETSVLSICLTTGSLHYVI 308
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2N775_GOSRA (MATE efflux family protein OS=Gossypium raimondii GN=B456_001G084200 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 1.065e-90
Identity = 155/239 (64.85%), Postives = 195/239 (81.59%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            VAIAT+F NVTGFSLL+G+ GALETL GQAYGA QY KLG+YTYC+I+  + ICLPV L W++MD+ L+ +GQDPQ++ +A+ Y++ LIP LF  AI+QS VR+FQSQS +LP+  SS AT+CFH+ +CWVLV K   G  G ALAI+ + WFNVI+LGFYMR+S SCE TRT+ + DVF S+KEF  FA+PSAVM CLEWWSFE+LVL+SGLLP+S+LETSVLSICLS+ SLHY + +
Sbjct:   62 VAIATSFTNVTGFSLLFGMAGALETLGGQAYGAGQYQKLGTYTYCSILSLITICLPVSLFWIFMDEFLIFMGQDPQISHVASIYSIWLIPALFADAILQSLVRYFQSQSQILPLFLSSCATICFHVPLCWVLVHKTNLGYVGAALAITLALWFNVIVLGFYMRWSASCESTRTVIVGDVFASIKEFLGFALPSAVMCCLEWWSFELLVLLSGLLPDSELETSVLSICLSTTSLHYFVPY 300
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: B9SPZ5_RICCO (MATE efflux family protein OS=Ricinus communis GN=RCOM_0467100 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.235e-90
Identity = 147/239 (61.51%), Postives = 190/239 (79.50%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            V++A++F N TGF+LL GL GALETL GQAYGA QY K GSY YCAII  LPICLP  +LW++MD++L+ IG DP+++  A RY++ LIP LFG+AI+QS VR+FQ+QSL+LPM+ SS ATL  HI +CW LVFK+ FG+ GGA++I  S W NVI L  YMR+S SCEKTR L  KDVF S+ EF+ FA+PSAVM CLEWW+FE+L L++G LPNSKLETSVLSIC+++ +++Y + +
Sbjct:   57 VSVASSFTNATGFALLIGLSGALETLCGQAYGAGQYKKFGSYLYCAIISLLPICLPASILWIFMDRILISIGLDPKISMEACRYSIGLIPALFGFAILQSLVRYFQTQSLILPMLISSCATLSAHIPLCWALVFKWEFGAIGGAMSIGLSYWLNVIFLACYMRWSSSCEKTRVLCWKDVFSSISEFWRFALPSAVMVCLEWWTFELLTLLAGFLPNSKLETSVLSICITTTTVNYYVQY 295
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U5FG70_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s10450g PE=4 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 6.210e-90
Identity = 142/220 (64.55%), Postives = 176/220 (80.00%), Query Frame = 2 
Query:   20 FCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSI 679
            F +VTGFSLL+GL GALETL GQAYGA QY  + +YTYCAII  + +CLP+  LWM+ DKLL+LIGQDP ++ +A +Y++CLIP LF YAI+Q+ +R+FQ+QSL+LPM+FSS A+LCFHI +CW LVFK   G  G ALAIS S W NVILLG YM+ S  CEKTR++  KDVF  ++EFF FA+PSAVM CLEWWS+E+L+L+SGLL N K ETSVLSI
Sbjct:   23 FTSVTGFSLLFGLAGALETLCGQAYGAEQYQTVRTYTYCAIISLILVCLPISFLWMFTDKLLILIGQDPSISHVARKYSICLIPNLFSYAILQALIRYFQTQSLILPMLFSSFASLCFHITLCWALVFKAEMGIIGAALAISLSYWLNVILLGLYMKCSSECEKTRSVFSKDVFFGIREFFRFAVPSAVMTCLEWWSYEVLILLSGLLRNPKEETSVLSI 242
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: DTX1_ARATH (MATE efflux family protein DTX1 OS=Arabidopsis thaliana GN=DTX1 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 1.773e-87
Identity = 136/238 (57.14%), Postives = 177/238 (74.37%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715
            VA+A +F NVTGFS++ GL GALETL GQAYGA QY K+G+Y Y AI  ++PIC  + +LW+Y++K+L+ +GQDP+++ IA  YA  LIP LFG AIV    RF  +Q LV+P++F+++ TL FH++VCW LVF FG G  G A+A S S WF  ++L  Y+R+S SCEKTR    +D   S+K+FF + IPSA M CLEWW FEIL+L SGLLPN KLETSVLSICL+ ++LHY IS
Sbjct:   67 VALANSFTNVTGFSIMCGLVGALETLCGQAYGAKQYEKIGTYAYSAIASNIPICFLISILWLYIEKILISLGQDPEISRIAGSYAFWLIPALFGQAIVIPLSRFLLTQGLVIPLLFTAVTTLLFHVLVCWTLVFLFGLGCNGPAMATSVSFWFYAVILSCYVRFSSSCEKTRGFVSRDFVSSIKQFFQYGIPSAAMICLEWWLFEILILCSGLLPNPKLETSVLSICLTIETLHYVIS 304
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE9_ARATH (MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 2.643e-87
Identity = 137/237 (57.81%), Postives = 177/237 (74.68%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+++GL GALETL GQAYGA QY K+G+YT+ AI+ ++PI + + +LW YMDKL V +GQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC +LV+ FG GS G ALAI  S WFNV++L  Y+R+S SCEKTR     D  LSVK+FF + IPSA M  +EW  FE L+L SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   70 VALATSFTNVSGFSVMFGLAGALETLCGQAYGAKQYAKIGTYTFSAIVSNVPIVVLISILWFYMDKLFVSLGQDPDISKVAGSYAVCLIPALLAQAVQQPLTRFLQTQGLVLPLLYCAITTLLFHIPVCLILVYAFGLGSNGAALAIGLSYWFNVLILALYVRFSSSCEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFEFLILSSGLLPNPKLETSVLSICLTTSSLHYVI 306
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE6_ARATH (MATE efflux family protein 6 OS=Arabidopsis thaliana GN=DTXL2 PE=3 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 1.198e-86
Identity = 136/237 (57.38%), Postives = 177/237 (74.68%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+++GL G+LETL+GQAYGA QY K+G+YTY AI  ++PIC+ + +LW+YM+KLL+ +GQDP ++ +A  YA+ LIP LF +AIV    RF  +Q LVLP+++ +L TL FHI VCW LV   G GS G ALAIS S WF  + L  Y+R+S SCEKTR    +D   SVK+FF + +PSA M CLEWW FE+L+L SGLL N KLETSVLSICL++ +LHY I
Sbjct:   67 VALATSFTNVSGFSIMFGLVGSLETLSGQAYGAKQYEKMGTYTYSAISSNIPICVLISILWIYMEKLLISLGQDPDISRVAGSYALRLIPTLFAHAIVLPLTRFLLAQGLVLPLLYFALTTLLFHIAVCWTLVSALGLGSNGAALAISVSFWFFAMTLSCYVRFSSSCEKTRRFVSQDFLSSVKQFFRYGVPSAAMLCLEWWLFELLILCSGLLQNPKLETSVLSICLTTATLHYVI 303
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE8_ARATH (MATE efflux family protein 8 OS=Arabidopsis thaliana GN=DTXL4 PE=3 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.783e-85
Identity = 133/234 (56.84%), Postives = 174/234 (74.36%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLH 703
            V +ATAF NV+GF +++GL GALETL GQAYGA QY K+G+YT+ AI+ ++PI + + +LW YMDKL V +GQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC +LV+ FG GS G ALAI  S WFNV++L  Y+R+S +CEKTR     D  LSVK+FF + IPSA M  +EW  FE+L+L SGLLPN KLETSVLSICL++ SLH
Sbjct:   70 VTLATAFANVSGFGIMYGLVGALETLCGQAYGAKQYTKIGTYTFSAIVSNVPIVVLISILWFYMDKLFVSLGQDPDISKVAGSYAVCLIPALLAQAVQQPLTRFLQTQGLVLPLLYCAITTLLFHIPVCLILVYAFGLGSNGAALAIGLSYWFNVLILALYVRFSSACEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFELLILSSGLLPNPKLETSVLSICLTTSSLH 303
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE5_ARATH (MATE efflux family protein 5 OS=Arabidopsis thaliana GN=DTXL1 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 8.313e-83
Identity = 136/237 (57.38%), Postives = 176/237 (74.26%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+L+GL GALETL GQAYGA QY K+G+YTY A   ++PIC+ + +LW+Y++KLL+ +GQDP ++ +A  YA+ LIP LF +A      RF  +Q LVLP+++ +L TL FHI VCW  V+ FG GS G A+AIS S WF V++L  Y+RYS SC+KTR     D    +K+FFHF +PSA M CLEWW FE+L+L SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   67 VALATSFTNVSGFSILFGLAGALETLCGQAYGAKQYEKIGTYTYSATASNIPICVLISVLWIYIEKLLISLGQDPDISRVAGSYALWLIPALFAHAFFIPLTRFLLAQGLVLPLLYCTLTTLLFHIPVCWAFVYAFGLGSNGAAMAISVSFWFYVVILSCYVRYSSSCDKTRVFVSSDFVSCIKQFFHFGVPSAAMVCLEWWLFELLILCSGLLPNPKLETSVLSICLTTASLHYVI 303
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE7_ARATH (MATE efflux family protein 7 OS=Arabidopsis thaliana GN=DTXL3 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 7.629e-82
Identity = 125/237 (52.74%), Postives = 174/237 (73.42%), Query Frame = 2 
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+++GL GALETL GQAYGA QY K+G+YTY A+  ++PIC  + +LW+Y++KLL+ +GQ+P ++ +A  Y++ L+P LF +AI     RF  +Q LV+ +++S++ TL FHI VCW LVF  G GS G A+AIS S WF  ++L  ++R+  SCEKTR     D   S+K++F + +PSA + CLEWW FE+L+L SGLLPN KLETSVLSICL+  +LHY I
Sbjct:   67 VALATSFTNVSGFSIMFGLVGALETLCGQAYGAEQYEKIGTYTYSAMASNIPICFIISILWIYIEKLLITLGQEPDISRVAGSYSLWLVPALFAHAIFLPLTRFLLAQGLVISLLYSAMTTLLFHIAVCWTLVFALGLGSNGAAIAISLSFWFYAVILSCHVRFFSSCEKTRGFVSNDFMSSIKQYFQYGVPSAGLICLEWWLFELLILCSGLLPNPKLETSVLSICLTIGTLHYVI 303
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: LAL5_ARATH (MATE efflux family protein LAL5 OS=Arabidopsis thaliana GN=LAL5 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.104e-37
Identity = 87/236 (36.86%), Postives = 139/236 (58.90%), Query Frame = 2 
Query:    8 IATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715
            +A ++  VTGF+ + GL GALETL GQ +GA  Y  LG +   + I SL   + + +LW + + + +L+ QDP +++ A  Y   L PGL  Y  +Q+ +RF Q+Q +V P++  S   L  +I   + LV   G G  G  +A S S W   + LGFY+  S   ++T T    + F  V      +IPSA M CLE+W+FEILV ++GL+ N ++ TS+++IC++++S+ Y ++
Sbjct:   73 LANSWATVTGFAFMTGLSGALETLCGQGFGAKSYRMLGIHLQSSCIVSLVFTILITILWFFTESVFLLLRQDPSISKQAALYMKYLAPGLLAYGFLQNILRFCQTQCIVTPLVLFSFLPLVINIGTTYALVHLAGLGFIGAPIATSISLWIAFVSLGFYVICSDKFKETWTGFSMESFHHVVLNLTLSIPSAAMVCLEYWAFEILVFLAGLMRNPEITTSLVAICVNTESISYMLT 308
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: ALF5_ARATH (MATE efflux family protein ALF5 OS=Arabidopsis thaliana GN=ALF5 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.402e-36
Identity = 80/237 (33.76%), Postives = 141/237 (59.49%), Query Frame = 2 
Query:    8 IATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            +A ++  V+GF+ + GL G+LETL GQ +GA +Y  LG +   + I SL   + + + W + + +  L+ QDP +++ A  Y     PGL  Y  +Q+ +RF Q+QS++ P++  S   L  +I   +VLV+  G G  G  +A S S W   + LG Y+  S   ++T T    + F  +      ++PSA M CLE+W+FEILV ++G++PN ++ TS+++IC++++++ Y +++
Sbjct:   81 LANSWATVSGFAFMVGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDPSISKQAALYMKYQAPGLLAYGFLQNILRFCQTQSIIAPLVIFSFVPLVINIATAYVLVYVAGLGFIGAPIATSISLWIAFLSLGTYVMCSEKFKETWTGFSLESFRYIVINLTLSLPSAAMVCLEYWAFEILVFLAGVMPNPEINTSLVAICVNTEAISYMLTY 317
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.492e-29
Identity = 74/227 (32.60%), Postives = 121/227 (53.30%), Query Frame = 2 
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICL 685
            +IAT       + ++ G+  A++T+ GQAYGA QY  +G     A++  L   + +  L+ Y   +L  +GQ   +A     +A  +IP ++ +A+     RF Q+Q++V P+ + SL     H ++ W++     FG  G AL +SFS W  V + G Y+  SP+C++T T      F  +  +F   + SAVM CLE W  + LV++SGLL N  +    +SIC+
Sbjct:   92 SIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICM 318
[Close]
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.06 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.730e-21
Identity = 72/238 (30.25%), Postives = 114/238 (47.90%), Query Frame = 2 
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            A A  F   TG+ +  G   A +TL    +GA +  +LG       I    + LP+CL+W Y   +L+ + Q P++AE + ++   LIPG  GY   +   +F Q+Q +     +  L T   ++ + ++LV  +G G KG  LA   S W + ILL  Y +Y    E     + K    +   F   ++   VM   EWW+FEI+ L++G L    L     S+ +++D L  TI F
Sbjct:   48 AFAYMFAMSTGWLIALGGTTAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKGAEAWNGWN-KRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQ--SVIMTTDQLLNTIPF 282
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061EHE6_THECC1.713e-12885.29MATE efflux family protein OS=Theobroma cacao GN=T... [more]
A0A0D2TXY4_GOSRA8.381e-10771.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2T139_GOSRA3.069e-10671.55MATE efflux family protein OS=Gossypium raimondii ... [more]
A0A0D2SVK7_GOSRA1.045e-9370.51Uncharacterized protein OS=Gossypium raimondii GN=... [more]
U7DYD6_POPTR9.390e-9261.70Uncharacterized protein (Fragment) OS=Populus tric... [more]
A0A0D3D4R0_BRAOL3.674e-9160.50MATE efflux family protein OS=Brassica oleracea va... [more]
R0G4M3_9BRAS1.029e-9061.60Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A0A0D2N775_GOSRA1.065e-9064.85MATE efflux family protein OS=Gossypium raimondii ... [more]
B9SPZ5_RICCO2.235e-9061.51MATE efflux family protein OS=Ricinus communis GN=... [more]
U5FG70_POPTR6.210e-9064.55Uncharacterized protein (Fragment) OS=Populus tric... [more]

Pages

back to top
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DTX1_ARATH1.773e-8757.14MATE efflux family protein DTX1 OS=Arabidopsis tha... [more]
MATE9_ARATH2.643e-8757.81MATE efflux family protein 9 OS=Arabidopsis thalia... [more]
MATE6_ARATH1.198e-8657.38MATE efflux family protein 6 OS=Arabidopsis thalia... [more]
MATE8_ARATH5.783e-8556.84MATE efflux family protein 8 OS=Arabidopsis thalia... [more]
MATE5_ARATH8.313e-8357.38MATE efflux family protein 5 OS=Arabidopsis thalia... [more]
MATE7_ARATH7.629e-8252.74MATE efflux family protein 7 OS=Arabidopsis thalia... [more]
LAL5_ARATH2.104e-3736.86MATE efflux family protein LAL5 OS=Arabidopsis tha... [more]
ALF5_ARATH4.402e-3633.76MATE efflux family protein ALF5 OS=Arabidopsis tha... [more]
TT12_ARATH8.492e-2932.60Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
YAO6_SCHPO2.730e-2130.25Uncharacterized transporter C11D3.06 OS=Schizosacc... [more]

Pages

back to top
Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0001112 ID=g.raimondii_cottongen_reftransV1_0001112; Name=g.raimondii_cottongen_reftransV1_0001112; organism=Gossypium raimondii; type=contig; length=720bp
TGTTGCCATCGCCACAGCTTTCTGCAATGTCACTGGCTTTAGTCTCCTTT
GGGGACTTTGTGGTGCACTCGAAACCCTAAACGGACAAGCATATGGGGCA
ACGCAATACTATAAACTAGGAAGCTACACTTATTGTGCCATAATATGTTC
CCTTCCAATTTGTCTCCCGGTGTGTCTCCTATGGATGTATATGGACAAAC
TATTAGTGCTAATAGGTCAAGACCCTCAAGTTGCAGAGATAGCTAATAGA
TACGCCATGTGTCTCATACCTGGATTATTTGGTTACGCCATTGTTCAATC
ACAAGTTCGTTTCTTCCAATCCCAGAGCTTGGTTCTTCCTATGATGTTTA
GTTCTCTTGCAACATTGTGTTTCCATATAATTGTTTGTTGGGTTTTGGTA
TTCAAATTTGGGTTTGGAAGCAAAGGAGGGGCATTGGCTATCAGTTTCTC
GAATTGGTTTAATGTTATATTGCTTGGGTTTTACATGAGATACTCACCTT
CATGTGAGAAAACCCGAACCCTCCATTTGAAAGATGTTTTCTTGAGTGTC
AAGGAGTTCTTTCATTTTGCCATACCTTCTGCAGTAATGGCTTGCCTCGA
ATGGTGGTCGTTCGAGATTCTTGTATTAATGTCTGGACTTCTGCCAAATT
CCAAGCTTGAAACATCGGTTCTTTCTATATGCCTTTCAAGTGATTCTTTG
CATTATACTATATCGTTTGG
back to top