g.raimondii_cottongen_reftransV1_0000146, g.raimondii_cottongen_reftransV1_0000146 (contig) Gossypium raimondii

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0MRU6_GOSAR (Gag-Pol polyprotein OS=Gossypium arboreum GN=F383_26972 PE=4 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.798e-50
Identity = 97/182 (53.30%), Postives = 126/182 (69.23%), Query Frame = 3

Query:    3 KVCKAEELTKEKRKAESEARDARKRPMGKSFQSQFKKSREIHSRSHASVGFSNRNRGNQCSGYKA*TTFIASVDN-RPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDASSPDVIT 545
            + CKAE+L KEKRKA+ EARD+RKR + K + S+ KK ++  S S+ SVG SNR+R  Q S +KA  T I SV++ RPN   C H G+ H G C++NDRACFKCG  DHFI+DC E+ +++  Q+TRLSNT+ +GRPP+NIGN    + VT+D     DARAP  AY I A E+A S D IT
Sbjct:  170 RACKAEDLNKEKRKADFEARDSRKRTISKYYLSESKKFQDSFSHSNTSVGHSNRDRVRQQSSFKAPATSITSVESARPNLPECKHCGKRHLGDCRLNDRACFKCGSLDHFIRDCQELVEQDTVQNTRLSNTATKGRPPRNIGNVCGGRGVTQDTTAISDARAPAGAYTICAREEALSLDGIT 351          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0PMM8_GOSAR (Gag-Pol polyprotein OS=Gossypium arboreum GN=F383_30953 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.637e-37
Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 3

Query:    3 KVCKAEELTKEKRKAESEARDARKRPMGKSFQSQFKKSREIHSRSHASVGFSNRNRGNQCSGYKA*TTFIASVDN-RPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGR 470
            +VCKAEEL KE+RK  SE+RD ++R MGK++QS  K+  E  +RS+ S+G+S RN+  Q    KA TT +ASV + RPN+  C   GR H G+C++N+R  FKCG   HFI++C EM ++E+ Q  + S   +RGRP KN G+GT S++   D A R
Sbjct:   14 RVCKAEELMKERRKVVSESRDLKRRQMGKTYQSSSKRLEEFTTRSNTSMGYSKRNKNQQNMASKAQTTLVASVGSARPNRPKCSQCGRRHLGECRVNERGSFKCGSLGHFIRECPEMDERERKQDAKASTAPFRGRPQKNPGSGTGSRSAPMDTAMR 170          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0NVL9_GOSAR (Gag-Pol polyprotein OS=Gossypium arboreum GN=F383_05300 PE=4 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.762e-33
Identity = 75/143 (52.45%), Postives = 87/143 (60.84%), Query Frame = 3

Query:  150 GFSNRNRGNQCSGYKA*TTFIASVDN-RPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVR-AYAIRAHEDASSPDVITDQEKRSPDL 572
            GFSNRN   Q SG+KA TT IASV N RPN+  C H GR HP +C MN RACFKCG  DHF KDC EM + EKFQS RL N + R RP KN GN  SSK+  +D AGR + R     A A R H     P ++    + S D+
Sbjct:   96 GFSNRNHRKQYSGHKAQTTLIASVGNARPNRPECQHCGRRHPSECWMNSRACFKCGSHDHFFKDCLEMVENEKFQSARLGNATSRRRPEKNPGNRVSSKSAPRDPAGRPEGRGLTPFALAKRLH-----PLIVYKLAQGSKDV 233          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0NIH9_GOSAR (Gag-Pol polyprotein OS=Gossypium arboreum GN=F383_19136 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.336e-32
Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 3

Query:  234 NKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDASSPDVI 542
            N+S C H GR  P +C++NDRACFKCG  DHFI DC EM +K+KFQSTRL+NT+ RGR  +N+ NG S K ++KD A R + RAP R YAIRA EDASS DVI
Sbjct:   39 NRSECQHCGRRRPSECRINDRACFKCGSHDHFIWDCPEMVEKDKFQSTRLNNTTTRGRLSRNMRNGASRKGMSKDSAMRSEVRAPRRTYAIRACEDASSLDVI 141          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0NH61_GOSAR (Brassinosteroid insensitive 1-like protein OS=Gossypium arboreum GN=F383_12883 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.181e-30
Identity = 60/109 (55.05%), Postives = 83/109 (76.15%), Query Frame = 3

Query:  222 DNRPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDASSPDVITD 548
            + +P+K  C   GRCH G C++++ +CFKC  QDH+IKD  EM +KE+FQ++R S T+ RGRP +N+ NG+SSKNVT+D A R++ARAP RA AI A +DA+SPDV T+
Sbjct:    3 NTKPSKPECQQCGRCHFGTCRVSEGSCFKCSSQDHYIKDFLEMVEKERFQNSRPSGTASRGRPSRNVRNGSSSKNVTRDTAVRYEARAPARASAICARKDATSPDVSTE 111          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0NNN8_GOSAR (Endogenous retrovirus group K, member 6 OS=Gossypium arboreum GN=F383_04282 PE=4 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.961e-28
Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 3

Query:  204 TFIASVDN-RPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDASSPDVITD 548
            T +ASV N R +++ C   G+ H G C+ +D +C++CG  DHF+KDC  ++K+   QS + S  + RGRPP+N GN +  +  ++D   R +ARAP RAYAIRA EDASSPDVITD
Sbjct:    6 TSVASVGNDRRDRTECKFCGKWHSGSCRFHDHSCYRCGSSDHFVKDCPRLSKQNVNQSGKPSTATARGRPPRNTGNASGGQRGSRDATTRSEARAPTRAYAIRAREDASSPDVITD 121          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0NCV8_GOSAR (Gag-Pol polyprotein OS=Gossypium arboreum GN=F383_03268 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.249e-25
Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = 3

Query:  159 NRNRGNQCSGYKA*TTFIASVDN-RPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDASSPDVIT 545
            ++NR N  S  +A TT +AS+++ RPN+  C   GRCH  +C++ +R CFKC   DHFI+DC E+ K EK Q  + S+    GRP KN G+G +SK   +D A R + RAP R YAI   E+  SPDVIT
Sbjct:  132 SKNRQNATS--RAQTTSVASINSARPNRPECSQCGRCHFNECRVKERGCFKCESLDHFIRDCPELEKGEKKQEVKGSSVPLMGRPQKNPGSGATSKITPRDDAMRSEGRAPARTYAIHTCEETESPDVIT 259          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0N9S0_GOSAR (Zinc finger CCHC domain-containing 8 OS=Gossypium arboreum GN=F383_12007 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.700e-24
Identity = 65/139 (46.76%), Postives = 83/139 (59.71%), Query Frame = 3

Query:  108 KKSREIHSRSHASVGFSNRNRGNQCSGYKA*TTFIASVDNRPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDA 524
            ++S+E + R   S   S+R+RG   SG KA  T +ASV+                  C  N+RACFKCG ++HFIKDC +  K+EKFQS R S T+ RGRPP+N  +G SSK V KD AGR ++R P RAY I   EDA
Sbjct:  114 RRSKETNPRMVVSAEDSHRDRGKAYSGSKAQATSVASVE------------------CWGNERACFKCGSREHFIKDCPKKVKEEKFQSARQSTTASRGRPPRNNRSGASSKTVMKDSAGRSESRTPARAYTIH-QEDA 233          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0MS95_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28233 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.439e-23
Identity = 55/81 (67.90%), Postives = 58/81 (71.60%), Query Frame = 2

Query:  536 CYHR--------SRKTESRPKPRKEQDCGLNRIVSHILVLSITKLARRSMDVGDLITLSIGHLGIVSLNILSTACIGTWSF 754
            CY R        SRKTES+P+P KEQD GL+RI     V SITKLAR S D GDLITLS  HLGIVSLNILS ACIGTWSF
Sbjct:    3 CYKREYESARLGSRKTESKPRPGKEQDFGLSRINCPYFVPSITKLARGSKDFGDLITLSTRHLGIVSLNILSMACIGTWSF 83          

BLAST of g.raimondii_cottongen_reftransV1_0000146 vs. ExPASy TrEMBL
Match: A0A0B0P5S7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28234 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.670e-22
Identity = 69/184 (37.50%), Postives = 94/184 (51.09%), Query Frame = 3

Query:    3 KVCKAEELTKEKRKAESEARDARKRPMGKSFQSQFKKSREIHSRSHASVGFSNRNRGNQCSGYKA*TTFIASVDN-RPNKSGCPHYGRCHPGKCQMNDRACFKCGFQDHFIKDCFEMTKKEKFQSTRLSNTSYRGRPPKNIGNGTSSKNVTKDLAGRFDARAPVRAYAIRAHEDASSPDVITDQ 551
            + CK EEL K K KAE E +D +KR M KSFQS  ++ RE   RS+   G+S+RNRG +  G KA TT IASV + + ++  CP  GRCHPG                                     N   RG+P ++     + K  +++ A + D +AP R YAI A E+ASSP+VI D+
Sbjct:  244 RACKVEELLKRKGKAEIEMQDTKKRRMSKSFQSTSRRPREFSMRSNFLAGYSSRNRGRRFMGQKAQTTSIASVGSIQSDRLECPQCGRCHPG-------------------------------------NAPVRGKPQRS-ARIRACKGASRNSAAKPDVKAPARTYAIHAREEASSPNVIMDE 389